CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria australasica GN=GDCSH PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.901e-59 Identity = 111/143 (77.62%), Postives = 126/143 (88.11%), Query Frame = -1 Query: 195 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSD 617 MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVELPE G SV + GFG VESVKATSDVNSPISGE++EVN+KLT+TPGL+N SPYE+GW+IKVKPS+PS+ Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSE 143
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ANASK (Glycine cleavage system H protein OS=Anaeromyxobacter sp. (strain K) GN=gcvH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.119e-35 Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 144 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 512 + L+Y HEW + +GS VGITD AQ LG+VV+VELP+ G VK+G FGVVES KA S++ +PISG+VIEVN L++ P +N PYEEGW+I ++PS P DLE+LMD AY F EE+ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQ 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ANAD2 (Glycine cleavage system H protein OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gcvH PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.119e-35 Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 144 DGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 512 + L+Y HEW + +GS VGITD AQ LG+VV+VELP+ G VK+G FGVVES KA S++ +PISG+VIEVN L++ P +N PYEEGW+I ++PS P DLE+LMD AY F EE+ Sbjct: 5 EDLRYTREHEWARRKGSAIVVGITDFAQQQLGDVVYVELPDVGDPVKKGESFGVVESTKAVSELFAPISGKVIEVNDPLSDAPETINEDPYEEGWMITIEPSDPKDLEALMDAAAYKAFVEEQ 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_TERTT (Glycine cleavage system H protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvH PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.022e-34 Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = -1 Query: 141 SSVLDGLKYASSHEWVK-HEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 524 S + LKY SSHEW + E T+GITDHAQ+ LG+VVFVE PE G+ V G GVVESVKA SD+ SP++GEVI VN L E P VN SPY+EGW KVKPS S+L+ MD +AY K E+++ Sbjct: 2 SEIRSELKYLSSHEWARVEEDGTVTIGITDHAQEALGDVVFVETPEVGSQVSAGEEAGVVESVKAASDIYSPVTGEVIAVNELLEEAPETVNESPYDEGWFFKVKPSDVSELDGAMDSEAYVKSVEDDS 130
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SCHPO (Putative glycine cleavage system H protein, mitochondrial OS=Schizosaccharomyces pombe GN=SPBP19A11.01 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.504e-34 Identity = 74/156 (47.44%), Postives = 103/156 (66.03%), Query Frame = -1 Query: 132 STANALRISCASKTPAFALSRCFSSV--LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEENAAH 593 S ++++ K A LS +S+V + HEWVK +G V TVGIT +A + LGEVVFVELPE +V G G G VESVK+ SDV SP+SG V +N L ++P V+SSP EEGW+ K+K SSP +L+SL++ ++Y +FC+EE+A+H Sbjct: 14 SLTSSVKTGFCLKAAAPTLSMKWSAVKYYSTKHFTKEHEWVKVDGDVGTVGITSYAANALGEVVFVELPEPETTVSVGDGIGAVESVKSASDVYSPVSGTVTSINESLGDSPDKVSSSPEEEGWICKIKLSSPDELKSLLNDESYAQFCKEEDASH 169
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SYMTH (Glycine cleavage system H protein OS=Symbiobacterium thermophilum GN=gcvH PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.003e-33 Identity = 66/120 (55.00%), Postives = 89/120 (74.17%), Query Frame = -1 Query: 147 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 506 LKY+ HEW++ EG++ VGIT AQD LG+VVFVELPE G +KQ FGVVESVK SD+ P SG+V+EVNTKL +P L+N PY EGW++K++ S+P++L++L+D AY F +E Sbjct: 8 LKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTVSDLYCPASGKVVEVNTKLESSPELINQDPYGEGWILKLELSNPAELDNLLDAAAYDAFTKE 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_RUBXD (Glycine cleavage system H protein OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.235e-33 Identity = 70/121 (57.85%), Postives = 86/121 (71.07%), Query Frame = -1 Query: 144 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 506 L Y +HEW + EG ATVGITDHAQ+ LG+VVFVELPE G+SV+ G FG +ESVKA SD+ SP+SGEV EVNT L E+P VN PY EGWL++V+ S D L+ P+ Y + EEE Sbjct: 8 LVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTIESVKAVSDLYSPVSGEVTEVNTSLEESPEKVNEDPYGEGWLLRVRLSEEPD---LLSPEEYARRLEEE 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_CARHZ (Glycine cleavage system H protein OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.980e-33 Identity = 64/127 (50.39%), Postives = 91/127 (71.65%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S V LKY+ HEW+K +G++ +GITD AQ LG++VF+ELP G + G FGVVESVKA SD+ +P+SG+V+EVN ++ E+P LVN PY +GW+IKV+ S+ ++L+ L+ P+ Y K EEE Sbjct: 2 SVVPKDLKYSREHEWIKVDGNIGIIGITDFAQKSLGDIVFIELPGVGDEISAGDSFGVVESVKAASDLYAPVSGKVVEVNEEVIESPQLVNEDPYGKGWMIKVEISNEAELDELLSPEDYEKLLEEE 128
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_YERE8 (Glycine cleavage system H protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.504e-33 Identity = 70/127 (55.12%), Postives = 92/127 (72.44%), Query Frame = -1 Query: 147 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 524 S+V LKYASSHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V ESVKA SD+ +PISGE+I VN +L +P LVNS+PY +GWL +K S S+L+SL+D +AY EE Sbjct: 2 SNVPADLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAVAESVKAASDIYAPISGEIIAVNAELESSPELVNSAPYTDGWLFSIKASDESELDSLLDAEAYLATIEE 128
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ERWCT (Glycine cleavage system H protein OS=Erwinia carotovora subsp. atroseptica GN=gcvH PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.504e-33 Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKYA+SHEWV HEG + +VGIT+HAQ+ LG++VF++LPE G V G V ESVKA SD+ +PISGEV+EVN L +P LVNS+PY +GWL ++K S SDL+ L+D + Y EE+ Sbjct: 2 SNVPTELKYATSHEWVLHEGDGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEVVEVNEDLENSPELVNSAPYTDGWLFRIKISDESDLDELLDAEGYQASLEED 129 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |