CX287134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHIDS (Glycine cleavage system H protein OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDVLSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SHEB5 (Glycine cleavage system H protein OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWV-KHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKYASSHEW+ K E TVGIT+HAQ+ LG++VFVELPE G +V G V ESVKA SD+ +PISGEVI VN L ++P LVNSS Y EGW +V PS S++++L+D + Y +EE Sbjct: 2 SNIPTELKYASSHEWIRKEEDGSYTVGITEHAQELLGDMVFVELPEVGDTVTAGEDCAVAESVKAASDIYAPISGEVIAVNEALEDSPELVNSSAYGEGWFFRVMPSDESEVDALLDAEGYQAVIDEE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_SALPB (Glycine cleavage system H protein OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S+V LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYVGGWIFKIKASDESELESLLDATAYEALLEDE 129
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_MOUSE (Glycine cleavage system H protein, mitochondrial OS=Mus musculus GN=Gcsh PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = -1 Query: 156 ALRMWASSTANALRIS----CASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 614 +LR+ A S AL C A R S++L K+ HEW+ E + TVGI++ AQ+ LG+VV+ LPE G +K+ FG +ESVKA S++ SP+SGEV EVN L E PGLVN S YE+GWLIK+ S PS+L+ LM +AY K+ Sbjct: 8 SLRVVAYSLRTALAFCSPRPCVPSAAAVRSLRTGSALLSVRKFTEKHEWITTEEGIGTVGISNFAQEALGDVVYCSLPEVGTKLKKQEEFGALESVKAASELYSPLSGEVTEVNEALAENPGLVNKSCYEDGWLIKMTLSDPSELDELMSEEAYEKY 164
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_METI4 (Glycine cleavage system H protein OS=Methylacidiphilum infernorum (isolate V4) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = -1 Query: 144 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 500 Y +HEWV G VATVGIT+HAQ L ++V++ELP+ G Q GVVESVKA SD+ +P+SGE++ VNT+L E P L+NS+PY EGW+ K+K ++P +L SL D +AY + +++ Sbjct: 9 YTDTHEWVNVSGDVATVGITEHAQRELSDIVYIELPKVGERFNQKAVVGVVESVKAASDLYAPVSGEILAVNTQLVEQPSLINSNPYGEGWIFKMKMTNPDELSSLKDAEAYQELLQDK 127
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPL (Glycine cleavage system H protein OS=Legionella pneumophila (strain Lens) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = -1 Query: 141 LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 515 ++ LK+ ++HEW++ + TVGITDHAQ+ LG++VFVELPE G V G GVVESVKA SD +PISG V VN + + P LVN PY EGWL+K+KPS P +++SL+ + Y EEN Sbjct: 1 MNDLKFTTTHEWLREDEEEVTVGITDHAQELLGDMVFVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPH (Glycine cleavage system H protein OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = -1 Query: 141 LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 515 ++ LK+ ++HEW++ + TVGITDHAQ+ LG++VFVELPE G V G GVVESVKA SD +PISG V VN + + P LVN PY EGWL+K+KPS P +++SL+ + Y EEN Sbjct: 1 MNDLKFTTTHEWLREDEEEVTVGITDHAQELLGDMVFVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPC (Glycine cleavage system H protein OS=Legionella pneumophila (strain Corby) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = -1 Query: 141 LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 515 ++ LK+ ++HEW++ + TVGITDHAQ+ LG++VFVELPE G V G GVVESVKA SD +PISG V VN + + P LVN PY EGWL+K+KPS P +++SL+ + Y EEN Sbjct: 1 MNDLKFTTTHEWLREDEEEVTVGITDHAQELLGDMVFVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPA (Glycine cleavage system H protein OS=Legionella pneumophila (strain Paris) GN=gcvH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 64/125 (51.20%), Postives = 85/125 (68.00%), Query Frame = -1 Query: 141 LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 515 ++ LK+ ++HEW++ + TVGITDHAQ+ LG++VFVELPE G V G GVVESVKA SD +PISG V VN + + P LVN PY EGWL+K+KPS P +++SL+ + Y EEN Sbjct: 1 MNDLKFTTTHEWLREDEEEVTVGITDHAQELLGDMVFVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125
BLAST of CX287134 vs. ExPASy Swiss-Prot
Match: GCSH_ECOL6 (Glycine cleavage system H protein OS=Escherichia coli O6 GN=gcvH PE=3 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = -1 Query: 144 SSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 524 S++ LKY+ HEW++ E TVGIT+HAQ+ LG++VFV+LPE GA+V G V ESVKA SD+ +P+SGE++ VN L+++P LVNS PY GW+ K+K S S+LESL+D AY E+E Sbjct: 2 SNIPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129 The following BLAST results are available for this feature:
BLAST of CX287134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287134 ID=CX287134; Name=CX287134; organism=Citrus clementina; type=EST; length=635bpback to top |