CX287285

Overview
NameCX287285
Unique NameCX287285
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA_HUMAN (UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 PE=1 SV=5)

HSP 1 Score: 214.927 bits (546), Expect = 2.018e-55
Identity = 109/177 (61.58%), Postives = 140/177 (79.10%), Query Frame = 2
Query:   20 VEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            +EVT KT ADVKGGTL  YEGK++L+EIAQVP  HV+EFKS+ KFKIFNTNNLW++L A+KRL E +A+ MEII N K +D G+ V+QLETA GAAI+ F++++G NV RSRFLPVK TSDLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD
Sbjct:  280 MEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELD 456          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA_PIG (UTP--glucose-1-phosphate uridylyltransferase OS=Sus scrofa GN=UGP2 PE=2 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 2.635e-55
Identity = 108/177 (61.02%), Postives = 139/177 (78.53%), Query Frame = 2
Query:   20 VEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            +E T K  ADVKGGTL  YEGK++L+EIAQVP  HV+EFKS+ KFKIFNTNNLW++L A+KRL E +A+ MEII NPK +D G+ V+QLETA GAAI+ F++++G NV RSRFLPVK TSDLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD
Sbjct:  280 MEATNKARADVKGGTLTQYEGKLRLVEIAQVPKPHVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELD 456          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.477e-54
Identity = 109/177 (61.58%), Postives = 134/177 (75.71%), Query Frame = 2
Query:   20 VEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALK-MEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            +EVT KT ADVKGGTLI YEGK KLLEIAQVP   V EFKSI+KFKIFNTNN+WVNLKA+ R+++ + L  M+II NPK  DG  ++QLE AAGAAI FF++A G NV RSRFLPVK+TSDL +VQS+LY+L  G +  N+ R     P ++LG  FKKV ++ +R K IP I+ELD
Sbjct:  274 MEVTNKTRADVKGGTLIQYEGKAKLLEIAQVPSSKVEEFKSIKKFKIFNTNNIWVNLKAMDRILKQNLLDDMDIIINPKVADGKNIIQLEIAAGAAIEFFNNARGVNVPRSRFLPVKSTSDLFIVQSNLYSLEKGVLVMNKNRPFTTVPLVKLGDNFKKVSDYQARIKGIPDILELD 450          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.446e-53
Identity = 114/184 (61.96%), Postives = 138/184 (75.00%), Query Frame = 2
Query:    8 AGHEVEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEV--DG--IKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            A + +E+T KT ADVKGGTLISY+G+V+LLE+AQVP EH++EFK+I KF  FNTNNLW+NLKA+KRL+E+  L+MEIIPN K +  DG  I VLQLETA GAAIR FD A G  V RSRFLPVK  SDLLLV+SDL+ L  G +  + +R  P NP I+LG  FKKV  F +R   IP I+ELD
Sbjct:  265 AEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIPHIPKIVELD 447          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 2.308e-51
Identity = 107/184 (58.15%), Postives = 131/184 (71.20%), Query Frame = 2
Query:    8 AGHEVEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEV----DGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            A + +E+T KT ADVKGGTLI Y+G V+LLEIAQVP +HV EFKSI+KFK FNTNNLW +L ++KR+V    L MEIIPN K +    + I ++QLETAAGAAIR F +A G NV R RFLPVK  SDLLLV+SDLY++  G V  N  R     P ++LG  FKKV +F +   SIP I+ELD
Sbjct:  271 AEYLMELTNKTKADVKGGTLIDYDGNVRLLEIAQVPPQHVEEFKSIKKFKYFNTNNLWFHLPSVKRVVNNHELSMEIIPNKKTIKHKGENINIIQLETAAGAAIRHFKNAHGVNVPRRRFLPVKTCSDLLLVKSDLYSINHGQVEMNPRRFGGTAPLVKLGAHFKKVADFSAHIPSIPKILELD 454          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA1_ENCCU (UTP--glucose-1-phosphate uridylyltransferase OS=Encephalitozoon cuniculi GN=UGP1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.443e-42
Identity = 90/180 (50.00%), Postives = 122/180 (67.78%), Query Frame = 2
Query:   11 GHEVEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIEL-GPEFKKVGNFLSRFKSIPSIIELD 547
            G  +EVT KT ADVKGGTLI Y+G ++LLEIAQVP    +EF S +KF IFNTNNLW+NLK +K+ +E     ++II N K +D   V+QLETA G+AI++F ++ G  V RSRFLPVK  SDL LV+S+L+   +G +  + +R     PT++L G  F K+  +   FK IP I+EL+
Sbjct:  261 GFLMEVTDKTRADVKGGTLIEYKGALRLLEIAQVPSNKKSEFTSFKKFTIFNTNNLWINLKEMKKKLEEGFFDLDIIENKKALDDETVIQLETAIGSAIKYFPNSCGVVVPRSRFLPVKTCSDLFLVESNLFVEKNGTLQLHPSRVPETCPTVKLIGENFSKIEKYEKCFKGIPDILELE 440          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA1_DICDI (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Dictyostelium discoideum GN=uppA PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.032e-31
Identity = 72/176 (40.91%), Postives = 110/176 (62.50%), Query Frame = 2
Query:   20 VEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            +EVT +   D  GG L+SY+ K+ LLE++QV  E +  FK    FK++NTNN+WVNLK++  L++ D L ++ I N    +   ++QLET AG  I+ F +++   V R R+ P+K+TS LL+ QS+++    G V  N  R+    P ++LG EF  V ++  RFKSIP ++ELD
Sbjct:  287 LEVTNRINTDSTGGILMSYKDKLHLLELSQVKPEKLKIFKD---FKLWNTNNIWVNLKSVSNLIKEDKLDLDWIVNYPLENHKAMVQLETPAGMGIQNFKNSVAIFVPRDRYRPIKSTSQLLVAQSNIFQFDHGQVKLNSKREGQDVPLVKLGEEFSTVSDYEKRFKSIPDLLELD 459          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA2_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC794.10 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.246e-30
Identity = 71/183 (38.80%), Postives = 109/183 (59.56%), Query Frame = 2
Query:   14 HEVEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEV----DGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDS 550
            + +E+T KT AD+K G L++ +G ++LLE  QVP++H  EF S + FK  NTNN+W+ L A+KR+VE   L ++I+PN + V    +  ++++  TA G+AI  F    G  V R RF+ VK +SDL LV+ DLY +  G +   E+R     P + +  EFK +     R   +PS+ +L S
Sbjct:  266 YSMEITDKTKADIKVGILVNQDGLLRLLETNQVPEQHREEFMSDKVFKYINTNNVWLYLPAVKRVVENRELNLDIMPNIETVYYNNEPARIIEFTTAIGSAISQFKKTEGIRVSRPRFISVKNSSDLFLVRCDLYNVDHGSLKIEESRLGFPPPVVRMSNEFKDIAELFCRIPYMPSMKDLVS 448          
BLAST of CX287285 vs. ExPASy Swiss-Prot
Match: UGPA2_YEAST (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=YHL012W PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.846e-16
Identity = 57/180 (31.67%), Postives = 92/180 (51.11%), Query Frame = 2
Query:   20 VEVTPKTLADVKGGTLISYEGKVKLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEV----DGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELD 547
            VEV  +T      G L +Y+GK++ +    + +E      S    +I NTNN+W++LK +K L+E+++L + I  +  ++    + I+ LQ +T     I FF ++    V R RFLP++   DL L++S LY L           K    P+I+LG EF     F      IP+I+EL+
Sbjct:  265 VEVVERTANVSNTGVLATYKGKLRSVYYNCLSNE------SASTCRIVNTNNIWIDLKKLKVLIESNSLNLPIHSSESKITHKNEEIECLQFKTQLVDCIAFFPNSRVLKVSRDRFLPLRTCKDLFLLKSTLYDLDSNGTFNLYPLKFGLLPSIDLGDEFATYETFKIGVPDIPNILELE 438          
The following BLAST results are available for this feature:
BLAST of CX287285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
UGPA_HUMAN2.018e-5561.58UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_PIG2.635e-5561.02UTP--glucose-1-phosphate uridylyltransferase OS=Su... [more]
UGPA2_DICDI8.477e-5461.58UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_YEAST1.446e-5361.96UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA1_SCHPO2.308e-5158.15Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA1_ENCCU7.443e-4250.00UTP--glucose-1-phosphate uridylyltransferase OS=En... [more]
UGPA1_DICDI2.032e-3140.91UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA2_SCHPO2.246e-3038.80Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA2_YEAST1.846e-1631.67Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionC01006H02SK Veg1 Citrus clementina cDNA clone C01006H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287285 ID=CX287285; Name=CX287285; organism=Citrus clementina; type=EST; length=552bp
GCCTCGTGCCGGGCACGAGGTGGAGGTTACTCCCAAAACCTTAGCAGATG
TTAAGGGTGGAACTCTTATTTCTTATGAAGGAAAAGTTAAGCTTCTGGAA
ATCGCTCAGGTCCCTGATGAACATGTCAATGAGTTCAAGTCAATAGAGAA
GTTCAAAATTTTCAACACGAATAACTTATGGGTGAACTTGAAGGCAATCA
AAAGGTTAGTGGAAGCTGATGCACTTAAGATGGAGATCATTCCAAATCCA
AAGGAAGTGGATGGAATCAAAGTTCTTCAGCTAGAAACTGCAGCTGGTGC
TGCAATTCGGTTCTTTGATCATGCTATTGGTTGTAACGTACATCGATCTC
GATTCCTTCCGGTGAAGGCAACTTCTGATCTGCTTCTTGTCCAGTCTGAT
CTTTACACCTTGGCCGATGGATTTGTTACTCGGAATGAAGCTAGAAAAAA
CCCTGCAAATCCAACTATTGAACTGGGACCTGAATTTAAGAAGGTTGGCA
ACTTTTTGAGCCGATTCAAGTCTATTCCTAGTATCATCGAGCTTGATAGC
CT
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