CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.687e-41 Identity = 83/139 (59.71%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D A+PLI V T D EA TGV+ A++VG PR+EGMER D++ N +I+K Q AL +HA N KVLVV NPANTNALI + A IP +N TCLTRLD NRA QI+ K V V DV NVIIWGNHSS+QYPD Sbjct: 57 EIQDGAYPLIADTVITADVKEAFTGVHYAILVGAMPRREGMERADLLKANAAIFKVQGKALAEHANKNVKVLVVGNPANTNALIAQVSANGIPKENFTCLTRLDQNRAKSQIALKAGVNVKDVHNVIIWGNHSSTQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 3.510e-41 Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL++ V+AT A +++AV+VG PR+EGMERKD++ NV I+K+Q +ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLQDVIATDKEEIAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGTALEKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.021e-40 Identity = 80/139 (57.55%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q +AL +++ + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KLNV DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTALKSAPSIPKENFSCLTRLDHNRAKAQIALKLNVASDDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.334e-40 Identity = 80/139 (57.55%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL++ V+ T A ++IA++VG PR+EGMERKD++ NV I+K+Q +AL+++A KV+VV NPANTN LI + APSIP +N +CLTRLDHNRA QI+ KL V +DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLREVIPTDKEEVAFKDLDIAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKTVKVVVVGNPANTNCLIASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTSNDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 164.466 bits (415), Expect = 1.742e-40 Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR++GMERKD++ NV I+K Q +AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.742e-40 Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR++GMERKD++ NV I+K Q +ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALEKYAKKSVKVIVVGNPANTNCLTACKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.742e-40 Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D A PL+K V+AT A +++A++VG PR++GMERKD++ NV I+K Q +AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QYPD Sbjct: 56 ELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDHC_ECHGR (Malate dehydrogenase, cytoplasmic OS=Echinococcus granulosus GN=MDH PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 1.475e-39 Identity = 77/139 (55.40%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AF ++ G+V T EA T +++A+MVG PRK+GMER+D++S NV I+K Q AL+++A KVLVV NPANTN LI+ ++APSIP +N T LTRLDHNRA+ Q++ K V + VKNV IWGNHS+ Q+PD Sbjct: 56 ELQDCAFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYAKKTVKVLVVGNPANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKNVCIWGNHSNKQFPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.248e-38 Identity = 75/139 (53.96%), Postives = 100/139 (71.94%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++G+ T DA A G N+A++VG PR +GMER D++ N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++KL V V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLQGIEVTDDARTAFDGTNVALLVGARPRTKGMERGDLLEANGGIFKPQGEAINAGAADDVRVLVVGNPANTNALIAQAHAPDVPAERFTAMTRLDHNRALTQLAQKLGVSVNDIKKLTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.781e-38 Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV D +A GVN+A++VG PR +GMER+D++ N I+ Q +A+ AA + +VLVV NPANTNALI + AP IPA T +TRLDHNRAL Q++ KLNV VSD+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLAGVDIYDDPRKAFDGVNVALLVGARPRTKGMERRDLLEANGGIFGPQGAAINDGAADDVRVLVVGNPANTNALIAQAHAPDIPADRFTAMTRLDHNRALSQLAAKLNVSVSDIKKLTIWGNHSATQYPD 195 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |