CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_XANCB (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=mdh PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.428e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I E AP + KN T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD Sbjct: 58 ELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMESAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.428e-34 Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G++AT A EA + ++VG PR GMERKD++ N +I+ AQ AL A + KVL V NPANTNALI + AP + +N T +TRLDHNRAL Q+S K+ ++++ + +WGNHS++QYPD Sbjct: 56 ELEDCAFPLVDGIIATDSAEEAFRDADYVLLVGAKPRGPGMERKDLLEANAAIFSAQGQALNAVAKRDVKVLAVGNPANTNALITQRNAPDLDPRNFTAMTRLDHNRALAQLSNKVGCHSTEIRGLAVWGNHSATQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.865e-34 Identity = 69/139 (49.64%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ +V T DA A + A++VG PR GMER D++ N +I+ Q A+ HA+ KVLVV NPANTNALI + AP I + T +TRLDHNR + Q++ KL+V ++D+ + IWGNHSS+QYPD Sbjct: 56 ELDDCAFPLLHSMVCTDDANVAFKDSDYALLVGARPRGPGMERNDLLEANAAIFSVQGKAINDHASRGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRGMSQLASKLDVSINDITKMTIWGNHSSTQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.865e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D AFPL+ GV A +D + A V+IA++VG PR GMERKD++ N I+ Q AL+ A+ N KVLVV NPANTNA I + AP++PAKN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + YPD Sbjct: 59 EIDDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTAIEKLTVWGNHSPTMYPD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_RUBXD (Malate dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=mdh PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.436e-34 Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++ V T D EA G N+ +++G PR+ GMER D++ N I+K Q A+ HAA + +VLVV NPANTN LI AP +P + + +TRLD NRA+ +++KL V V DV+++++WGNHS + +PD Sbjct: 54 ELYDCAFPLLEAVDITADPKEAFDGANVCLLIGARPRQRGMERADLLEANGQIFKPQGRAINDHAADDVRVLVVGNPANTNCLIAMNNAPDVPRERFSAMTRLDENRAVSMLAQKLGVGVEDVRDLVVWGNHSPTMFPD 192
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.436e-34 Identity = 69/139 (49.64%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q +AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD Sbjct: 57 ELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKTGKPVASIEKLAVWGNHSPTMYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.182e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV +DA + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCMM (Malate dehydrogenase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=mdh PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.182e-34 Identity = 71/139 (51.08%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV +DA + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q++ K V V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.182e-34 Identity = 69/139 (49.64%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q +AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K V+ ++ + +WGNHS + YPD Sbjct: 57 ELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_XANCP (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris GN=mdh PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.156e-34 Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V T DA A +++A++VG PR GMERKD++ +N I+ AQ +AL + A + KVLVV NPANTNA I + AP + KN T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD Sbjct: 58 ELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPD 196 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |