CX287318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 9.258e-34 Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V T DA A +IA++VG PR GMERKD++ +N I+ AQ +AL + A+ + KVLVV NPANTNA I + AP + +N T + RLDHNRAL Q+S KL V ++ +++WGNHS + YPD Sbjct: 58 ELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSAKLGKPVGGMEKLVVWGNHSPTMYPD 196
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.209e-33 Identity = 69/139 (49.64%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL++ + T D A +NIA++VG PR +GMERKD++ N +I++AQ AL++ A + KVLVV NPANTNA I + APS+ + + + RLDHNRA+ Q++ K+ VS V+ +I+WGNHSS+QYPD Sbjct: 56 ELDDCAFPLLRDITITDDPKTAFRDINIAMLVGARPRTKGMERKDLLEANGTIFRAQGKALDEVAGRDVKVLVVGNPANTNAYITMKNAPSLKPTSFSSMMRLDHNRAVFQLAVKVGQPVSSVRKMIVWGNHSSAQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.209e-33 Identity = 69/139 (49.64%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ GV D + G N+A++VG PR GMER D++ N +I+ AQ AL + AA + +V V NPANTNALI AP IP + + LTRLDHNRA+ Q+++K +V+D+K + IWGNHS++QYPD Sbjct: 57 ELDDCAFPLLSGVEIGADPNKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMSNAPDIPRERFSALTRLDHNRAISQLAKKTGAKVTDIKKMTIWGNHSATQYPD 195
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.209e-33 Identity = 70/139 (50.36%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+VAT D A V +A++VG PR +GMERKD++ N +I+ Q AL HAA + KVLVV NPANTNA I + AP + KN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D Sbjct: 56 ELEDCAFPLLAGMVATDDPNVAFKDVKVALLVGARPRSKGMERKDLLEANGAIFTVQGKALNDHAARDVKVLVVGNPANTNAWIAMKSAPDLDPKNFTAMLRLDHNRALSQIAAKTGKPVASIEKLAVWGNHSPTMYAD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.579e-33 Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFPL+ G+V + D A + A++VG PR GMERKD++ N +I+ Q A+ HA+ + KVLVV NPANTNALI + AP I + T + RLDHNR L Q++ KL+V + D+ + IWGNHS++QYPD Sbjct: 56 ELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAINDHASRDIKVLVVGNPANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPD 194
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CORGL (Malate dehydrogenase OS=Corynebacterium glutamicum GN=mdh PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.579e-33 Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD Sbjct: 61 ELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPD 199
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_CORGB (Malate dehydrogenase OS=Corynebacterium glutamicum (strain R) GN=mdh PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.579e-33 Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL+D+AFPL++ + T DA EA G N A +VG PR +G ER D+++ N I+ Q A+ +AA + +VLVV NPANTNALI AP +PA + RLDHNRA+ Q++ KL ++ N+++WGNHS++Q+PD Sbjct: 61 ELLDSAFPLLRNITITADANEAFDGANAAFLVGAKPRGKGEERADLLANNGKIFGPQGKAINDNAADDIRVLVVGNPANTNALIASAAAPDVPASRFNAMMRLDHNRAISQLATKLGRGSAEFNNIVVWGNHSATQFPD 199
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 1.579e-33 Identity = 68/139 (48.92%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D AFPL+ G+ A D + A ++A++VG PR GMERKD++ N I+ Q A++ A+ N KVLVV NPANTNA I + APS+PAKN T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D Sbjct: 59 EIDDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYAD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.694e-33 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 E+ D AFPL+ G+ A D + A V++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +P +N T + RLDHNRAL QI+ K VS ++ + +WGNHS + Y D Sbjct: 59 EIEDCAFPLLAGMEAHADPMTAFKDVDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYAD 197
BLAST of CX287318 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.694e-33 Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 23 ELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPD 439 EL D AFP + V DA GV +A++VG PR +GMER D++S N +I+ AQ AL + AA + ++ V NPANTNALI AP IPA + LTRLDHNRA+GQ++ K + +V D++ + +WGNHS++QYPD Sbjct: 56 ELDDCAFPALDSVEIGDDADHIFDGVTLALLVGARPRSKGMERGDLLSANGAIFTAQGKALNRVAADDVRIGVTGNPANTNALIAMSNAPDIPASRFSALTRLDHNRAIGQLAAKTHARVGDIRKMTVWGNHSATQYPD 194 The following BLAST results are available for this feature:
BLAST of CX287318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287318 ID=CX287318; Name=CX287318; organism=Citrus clementina; type=EST; length=440bpback to top |