CX287325

Overview
NameCX287325
Unique NameCX287325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length414
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: TPA_BILWA (Taurine--pyruvate aminotransferase OS=Bilophila wadsworthia GN=tpa PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.548e-14
Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEP 394
            GR G  FG   ++++PD+V+ AK ++S Y PI   + + +V  + ++  ++T   F    T+ G     A A+  ++I +  N++E   K+  +  +G+K   +  PIIG++RG GL  G E   +++  EP
Sbjct:  258 GRTGKWFGYQHFNVQPDIVTMAKGVASGYAPISCTVTTEKVFQDFVNDPADTDAYFRDISTFGGCTSGPAAALANIEIIERENLLENCTKMGDRLLEGLKGLMAKHPIIGDVRGKGLFAGIEIVKDRATKEP 389          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_OCEIH (Ornithine aminotransferase OS=Oceanobacillus iheyensis GN=rocD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.245e-14
Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 2
Query:    2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 367
            F R G MF C+  +++PD+    KAL     P+ AI  + E+ +V      T GS  HG T+ G+P++CAV++ A+ + +E N+V +  +    F D ++A +    I E+R  GL +G EF
Sbjct:  233 FARTGKMFACEWENVEPDIYVMGKALGGGVFPVSAIAANNEIMDVF-----TPGS--HGSTFGGNPLACAVSMAAIDVIEEENLVNKSLESGKYFADKLRAVNFEG-IKEVRARGLFIGMEF 346          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACCR (Ornithine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rocD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.245e-14
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 2
Query:    8 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPP 403
            R G +F CD  ++ PD+    KAL     PI  +  + ++  V    S       HG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E       NEP  P
Sbjct:  234 RTGKVFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP 351          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: AGT2_PONAB (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo abelii GN=AGXT2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.245e-14
Identity = 40/137 (29.20%), Postives = 74/137 (54.01%), Query Frame = 2
Query:    2 FGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP-KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE 406
            FGRLG+ F G   + + PD+V+ AK + + + P+ A++ +PE+++ +  +        H  T+ G+P++CA+    L++ KE N+ E   ++         K   +  I+G++RG GL++G E   +K    P P E
Sbjct:  326 FGRLGSHFRGFQTHDVLPDIVTMAKGIGNGF-PMAAVVTTPEIAKSLVKR------LQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLQFAKLRDEFEIVGDVRGKGLMIGIEMVQDKISRRPLPRE 455          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_EXISA (Ornithine aminotransferase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rocD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14
Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G  F  +   + PD+    KAL     PI  +    E+  V +  S       HG T+ G+P++ AV++ AL++ +E N+ E+  ++   F D +K+  D+P+I ++RG GL +G E  ++  P
Sbjct:  232 GRSGKWFAIEWEDVTPDMYILGKALGGGVFPISCVAADQEILSVFNPGS-------HGSTFGGNPLASAVSVAALEVLEEENLPERSLELGTYFMDRLKSI-DNPMIRDVRGRGLFIGIELTESARP 350          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT_BACHD (Ornithine aminotransferase OS=Bacillus halodurans GN=rocD PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14
Identity = 41/120 (34.17%), Postives = 62/120 (51.67%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 364
            GR G  F CD   +KPD+    KAL     PI  +    ++  V    S       HG T+ G+P++CAV+I AL++ +E  +VE+  +        +K   D+PII ++RG GL +G E
Sbjct:  234 GRSGKWFACDWEDVKPDMYILGKALGGGVFPISVVCADRDILGVFEPGS-------HGSTFGGNPLACAVSIAALEVLEEEKLVERSYEYGNYLLTKLKEI-DNPIIKDVRGRGLFIGVE 345          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: AGT2_BOVIN (Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus GN=AGXT2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14
Identity = 40/137 (29.20%), Postives = 75/137 (54.74%), Query Frame = 2
Query:    2 FGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKSPNEPFPPE 406
            FGRLG+ F G   + + PD+V+ AK + + + P+ A++ +P++++ +  +        H  T+ G+P++CAV    L++ KE N+ E   ++       +    D   I+G++RG GL++G E   +K   +P P E
Sbjct:  326 FGRLGSHFWGFQTHDVLPDIVTMAKGIGNGF-PMAAVVTTPDIAKSLTKR------MLHFNTFGGNPMACAVGSAVLEVIKEENLQENSQEVGTYMLLKLAKLRDEFEIVGDVRGKGLMIGIEMVKDKESRQPLPRE 455          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: BIOA_HELPJ (Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Helicobacter pylori J99 GN=bioA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.236e-13
Identity = 36/126 (28.57%), Postives = 70/126 (55.56%), Query Frame = 2
Query:    2 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF-----QDGVKAFSDSPIIGEIRGTGLILGTE 364
            FGR G+MF  ++  IKPD +  +K +S  Y+P+ A+L   E+    ++      +F H  +Y+G+ ++CA A   L I+++ N++E+ NK   +F     Q+ +K   +  ++ ++R  G++   E
Sbjct:  251 FGRTGSMFAYEQCGIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEK-NKALSEFIFSALQNALKPLIERQVVSDLRHLGMVFAFE 375          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: ARGD_CLOAB (Acetylornithine aminotransferase OS=Clostridium acetobutylicum GN=argD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.236e-13
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE-QVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 370
            GR+G++F   K+ + PD+V  AKAL   + PIGA+L    V+       ++     HG TY G+P++CAVAI  LK   ++ +VE  VN+ +    D +    +   +I ++RG GL++G E A
Sbjct:  222 GRVGSLFAYQKFEVVPDIVCIAKALGGGF-PIGAMLAKESVA-------SSFVPGDHGNTYGGNPLACAVAIAVLKELVDKKVVEINVNEKSKYLFDKLMTLKEKYKVINDVRGMGLLIGVEVA 337          
BLAST of CX287325 vs. ExPASy Swiss-Prot
Match: OAT2_STAAW (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MW2) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2
Query:    5 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP 385
            GR G +F  D  ++KPD+    KAL     PI  +L   EV +V      T G  SHG T+ G+P++CA +I AL +  + ++  +  ++   F++ +K   D P I E+RG GL +G E  ++  P
Sbjct:  233 GRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVF-----TPG--SHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQI-DHPSIKEVRGRGLFIGVELNESARP 351          
The following BLAST results are available for this feature:
BLAST of CX287325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TPA_BILWA5.548e-1429.55Taurine--pyruvate aminotransferase OS=Bilophila wa... [more]
OAT_OCEIH7.245e-1434.43Ornithine aminotransferase OS=Oceanobacillus iheye... [more]
OAT_BACCR7.245e-1432.58Ornithine aminotransferase OS=Bacillus cereus (str... [more]
AGT2_PONAB7.245e-1429.20Alanine--glyoxylate aminotransferase 2, mitochondr... [more]
OAT_EXISA9.463e-1430.71Ornithine aminotransferase OS=Exiguobacterium sp. ... [more]
OAT_BACHD9.463e-1434.17Ornithine aminotransferase OS=Bacillus halodurans ... [more]
AGT2_BOVIN9.463e-1429.20Alanine--glyoxylate aminotransferase 2, mitochondr... [more]
BIOA_HELPJ1.236e-1328.57Adenosylmethionine-8-amino-7-oxononanoate aminotra... [more]
ARGD_CLOAB1.236e-1335.48Acetylornithine aminotransferase OS=Clostridium ac... [more]
OAT2_STAAW1.614e-1333.86Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]

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Properties
Property NameValue
Genbank descriptionC01008C10SK Veg1 Citrus clementina cDNA clone C01008C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287325 ID=CX287325; Name=CX287325; organism=Citrus clementina; type=EST; length=414bp
ATTTGGAAGACTTGGCACAATGTTTGGTTGTGACAAATACAGCATTAAAC
CAGATCTTGTGTCCTTCGCAAAGGCCCTTTCTTCAGCATATATGCCCATT
GGAGCTATTCTTGTGAGTCCCGAAGTTTCAGAAGTCATTCACTCTCAAAG
CAACACACTTGGTTCTTTCTCTCATGGATTTACTTATTCTGGGCATCCTG
TTTCCTGTGCCGTTGCCATCGAAGCGCTTAAGATTTACAAGGAAAGAAAT
ATTGTTGAGCAAGTAAATAAGATAGCGCCAAAGTTTCAAGATGGTGTAAA
AGCCTTTTCTGATAGTCCCATCATTGGAGAGATTCGGGGCACTGGTTTGA
TTCTTGGTACAGAGTTTGCAGACAACAAGTCTCCAAATGAACCGTTCCCT
CCTGAATGGGGGAT
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