CX287332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO_CHRVI (Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.194e-18 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 178 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 VTD +++ V S PVLV++WA WCGPC+M P+ DE++ +Y G++K K N DE+P+ RYG R IPT+M+F+ Sbjct: 7 VTDDSFEEEVXKSPDPVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNTPPRYGXRGIPTLMLFR 82
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO_THIFE (Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 178 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 V+D ++++ VL S PVLV+FWA WCGPC+MI PI++E++ +Y +L+ K N DE+P+ +Y IR IPT+++FK Sbjct: 8 VSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPTLLLFK 83
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_CHLTE (Thioredoxin-2 OS=Chlorobium tepidum GN=trx2 PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 181 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 TD +Q+ +L+S LV+FWA WCGPC M+ P+I+EL+ Y GK K+N DE+P+ A +YGIRSIPT++I K Sbjct: 9 TDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTAGQYGIRSIPTMLIIK 83
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO_HELPY (Thioredoxin OS=Helicobacter pylori GN=trxA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.857e-17 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 229 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 LV+FWAPWCGPC+M+ P+IDEL+ +Y GK K KVNTDE ++ ++GIRSIPT++ K Sbjct: 22 LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTK 80
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO_HELPJ (Thioredoxin OS=Helicobacter pylori J99 GN=trxA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.857e-17 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 229 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 LV+FWAPWCGPC+M+ P+IDEL+ +Y GK K KVNTDE ++ ++GIRSIPT++ K Sbjct: 22 LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTK 80
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_CORNE (Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 5.404e-17 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 181 TDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 TD +Q+ VLD+ +PVLV+FWA WC PC+ I P+++ELS +Y GK+K KV+ A +Y IR+IP +++FK Sbjct: 9 TDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVKYNIRNIPALLMFK 83
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.217e-17 Identity = 37/78 (47.44%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 178 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFK Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFK 114
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.217e-17 Identity = 37/78 (47.44%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 178 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFK Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFK 114
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_ECOL6 (Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.217e-17 Identity = 37/78 (47.44%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 178 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFK Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFK 114
BLAST of CX287332 vs. ExPASy Swiss-Prot
Match: THIO2_ECO57 (Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.217e-17 Identity = 37/78 (47.44%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 178 VTDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 405 V +AT ++L +L PV+++FWAPWCGPCR PI ++++++ GK++ KVNT+ +++R+GIRSIPT+MIFK Sbjct: 37 VINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFK 114 The following BLAST results are available for this feature:
BLAST of CX287332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287332 ID=CX287332; Name=CX287332; organism=Citrus clementina; type=EST; length=406bpback to top |