CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_CRIGR (Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1B_BOVIN (Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 3.186e-71 Identity = 121/133 (90.98%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHS 140 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |