CX288489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 1.025e-69 Identity = 115/133 (86.47%), Postives = 131/133 (98.50%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFFSETGAGKHVPRAVFVDLEP+V+DEVR+GTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKE++DL LDRIRKLAD CTGLQGFL+F++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 1.748e-69 Identity = 117/133 (87.97%), Postives = 130/133 (97.74%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+G GDD+FNTFFSETG+GKHVPRAV+VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++ Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGTGDDSFNTFFSETGSGKHVPRAVYVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 1.748e-69 Identity = 117/134 (87.31%), Postives = 130/134 (97.01%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 HIGQAG QVGNACWELYCLEHGI PDGQMPSDK+VGGGDDAFNTFFSET +GKHVPRA+++DLEPTVIDE+RTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDLCLDR+RKLAD C+GLQGFLVF++V Sbjct: 8 HIGQAGAQVGNACWELYCLEHGINPDGQMPSDKSVGGGDDAFNTFFSETSSGKHVPRAIYLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLCLDRVRKLADQCSGLQGFLVFHSV 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 2.982e-69 Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 HIGQAGIQVGNACWELYCLEHGI+ DG MPSD +VG DAFNTFFSETG+GKHVPRA+FVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCLDR+RKLADNCTGLQGFLVFNAV Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIEHDGTMPSDSSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 3.895e-69 Identity = 117/133 (87.97%), Postives = 128/133 (96.24%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFF ETGAGKHVPRAVFVDLEPTVIDE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+ LDRIRKLADNC GLQGFL+F++ Sbjct: 8 HVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 5.087e-69 Identity = 122/134 (91.04%), Postives = 126/134 (94.03%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 HIGQAGIQVGNACWELYCLEHGIQ DG MPSD TVG DAFNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+GKEIVDLCL R+R+LADNCTGLQGFLVFNAV Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLGRVRQLADNCTGLQGFLVFNAV 141
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 5.087e-69 Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 HIGQAGIQVGNACWELYCLEHGIQP+GQMP+D T GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTG+YRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVD+ LDRIRKL+DNCTGLQGFLVF+A Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPNGQMPADNTTGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGSYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDIVLDRIRKLSDNCTGLQGFLVFHA 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 6.644e-69 Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+GGGDD+F TFFSETGAGKHVPRAVFVDLEPTVIDEVR GTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+D LDRIRKLAD CTGLQGFLVF++ Sbjct: 8 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHS 140
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 8.677e-69 Identity = 116/133 (87.22%), Postives = 128/133 (96.24%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 399 H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT GGGDD+FNTFFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+D+ LDR RKLAD CTGLQGFL+F++ Sbjct: 2 HVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLDRTRKLADQCTGLQGFLIFHS 134
BLAST of CX288489 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 1.133e-68 Identity = 118/134 (88.06%), Postives = 127/134 (94.78%), Query Frame = 1 Query: 1 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 402 H+GQAGIQVGNACWEL+CLEHGIQPDGQMP D+ DDAFNTFFSETGAGKHVPR VFVDLEPTV+DEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE++D+CLDRIRKLADNCTGLQGFL+F+AV Sbjct: 8 HVGQAGIQVGNACWELFCLEHGIQPDGQMPPDQAGRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAV 141 The following BLAST results are available for this feature:
BLAST of CX288489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288489 ID=CX288489; Name=CX288489; organism=Citrus clementina; type=EST; length=434bpback to top |