CX288511

Overview
NameCX288511
Unique NameCX288511
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length274
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1179..1452. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.545e-40
Identity = 77/87 (88.51%), Postives = 84/87 (96.55%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+LGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++GKYEKKVYVLPK
Sbjct:  355 IDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPK 441
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.308e-39
Identity = 76/87 (87.36%), Postives = 85/87 (97.70%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D+LGLE++PGVKRITIKPQTDR VFP+TNSGI+VLAEGRLMNLGCATGHPSFVMS SFTNQVIAQLELWKE+++GKYEKKVYVLPK
Sbjct:  355 IDMLGLESFPGVKRITIKPQTDRRVFPDTNSGILVLAEGRLMNLGCATGHPSFVMSSSFTNQVIAQLELWKERASGKYEKKVYVLPK 441
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.006e-23
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            +D  GL  YPG+K I IKP+ D W FP+ ++ I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQL+L++++  G  E KVY LPK
Sbjct:  359 IDTDGLMKYPGIKHIPIKPEYDMWEFPDGHA-ILLLAEGRLLNLGCATGHPSFVMSMSFTNQTLAQLDLYEKR--GNLEMKVYTLPK 442
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.113e-22
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPK
Sbjct:  353 IQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPK 436
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.113e-22
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPK
Sbjct:  353 IQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPK 436
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.113e-22
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPK
Sbjct:  353 IQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPK 436
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.113e-22
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPK
Sbjct:  353 IQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPK 436
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.453e-22
Identity = 53/87 (60.92%), Postives = 68/87 (78.16%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L+ YPG+KR+ IKPQ DR+ FP+ +S II+LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KY+  VY LPK
Sbjct:  362 IQVDALKHYPGIKRVNIKPQVDRYYFPDGHS-IILLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYDINVYRLPK 443
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_PLAF7 (Adenosylhomocysteinase OS=Plasmodium falciparum (isolate 3D7) GN=PFE1050w PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.479e-22
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L  Y G+    +KPQ DR   P  N  IIVLA GRL+NLGCATGHP+FVMS SF NQ  AQL+LW+ K T KYE KVY+LPK
Sbjct:  350 IQVNELFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPK 435
[Close]
BLAST of CX288511 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.212e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = -1 
Query:    2 LDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 262
            + V  L    GV++I IKPQ D++VF   N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ +  YEKKVY+LPK
Sbjct:  353 IQVDALNALKGVEKINIKPQVDKYVFGNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDS--YEKKVYILPK 436
The following BLAST results are available for this feature:
BLAST of CX288511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
SAHH_MESCR1.545e-4088.51Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_PHASS1.308e-3987.36Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_TRIVA1.006e-2360.92Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_XANOP1.113e-2258.62Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM1.113e-2258.62Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANC51.113e-2258.62Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANAC1.113e-2258.62Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_BACFR1.453e-2260.92Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_PLAF72.479e-2259.77Adenosylhomocysteinase OS=Plasmodium falciparum (i... [more]
SAHH_XANCP7.212e-2257.47Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionC02001C03SK IF1 Citrus clementina cDNA clone C02001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288511 ID=CX288511; Name=CX288511; organism=Citrus clementina; type=EST; length=274bp
GCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCC
TTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAACAGGACAT
CACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGACGTCCCT
CAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCACCTATCA
GTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCTCAAGACC
GAGCACATCAAGGGGGGGCCCGGT
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