CX288518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.793e-23 Identity = 59/156 (37.82%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSL 462 NL+N+AA+ A + A+S ++++ S DRI+ G E + ++K + AYHE GHA+ T K T++PRG + G+T +P D ++++ A + +GGRAAEE+++G ++T+GA D+ + T +A++MVT FGMS+ IGP SL Sbjct: 479 NLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL 634
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23 Identity = 67/169 (39.64%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAICGT----LTPGHDPVQKVTLVPR-GQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSG 483 NL+NEAA+LAGR+ K + + +++R +AG+E + G K++VA HE GHA+ GT L G V+K++++PR G A G T+ P S+D L+ +L R+V LGGRAAEEV++ G ++TGA D+++ T +A + V +G+++ IGP S+ S G Sbjct: 539 NLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSG-RISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGG 706
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23 Identity = 69/169 (40.83%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGT-VMTDGKSKSLVAYHEVGHAICGT----LTPGHDPVQKVTLVPR-GQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSG 483 NL+NEAA+LAGR K + + +++R +AG+E G K++VA HEVGHA+ GT L PG V+K++++PR G A G T+ P ++D L+ +L R+V LGGRAAEEV+ G V+TGA D+++ T +A + V +G+++ IGP S+ S G Sbjct: 560 NLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSG-RVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGG 727
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.812e-23 Identity = 60/150 (40.00%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+ NEAA++A R I+ + + +IDR++ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+D+ L++K+QLF LGGRAAEEV+ G +++TGA DL+++T + V +G SE Sbjct: 534 NVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--KISTGAQNDLEKVTKMTYAQVAVYGFSE 680
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.897e-23 Identity = 60/150 (40.00%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+ NEAA++A R + I+ + + +IDRI+ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAEEV+ G ++TGA DL+++T + V +G SE Sbjct: 549 NVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--RISTGAQNDLEKVTKMTYAQVAVYGFSE 695
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 53/148 (35.81%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS 441 N+ NE A++A R + + +I+R+ AG+E + + + K+ VA+HE GHA+ G DP+ KV+++PR QA G ++P D L+S+ Q+ ++ L GR +EE+ FG ++T+GA+ D Q++T +A+ VT +GMS Sbjct: 510 NVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQALGYASYLPKDQ-YLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMAQAYVTQYGMS 656
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 56/149 (37.58%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG-MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+LNEAA++A R+ K I++ +ID+ +DR +AG + + + + +VAYHE GHAI G + V+KVT+VPRG+ G +P ++ + L ++ +GGR EE++FG T GA+ D+++ T +A+ MVT +GMS+ Sbjct: 405 NVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQPTNFHLQDQLASLMGGRLGEEIVFG--VATPGASNDIEKATHIARSMVTEYGMSK 551
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+ NEAA++A R A ++ D +IDR++ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAE+V+ G ++TGA DL+++T + V +G S+ Sbjct: 541 NVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLIG--RISTGAQNDLEKVTKMTYAQVAVYGFSD 687
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22 Identity = 57/150 (38.00%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGK-SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE 444 N+ NEAA++A R A ++ + +IDR++ G+E K + VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAE+V+ G +++TGA DL+++T + V +G S+ Sbjct: 535 NVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLIG--KISTGAQNDLEKVTKMTYAQVAVYGFSD 681
BLAST of CX288518 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.420e-20 Identity = 60/162 (37.04%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 1 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGM-EGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQ 477 N+ NEAA+ A R G ++ + + +++R++AG + + + + + +VA+HE GHA+ G L + V KV++ PR A G + +P D L +K+QLF R+ LGGRAAE + F VT+GA DL+++T +A MV FGM+ IGP S + + Sbjct: 523 NICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ-YLFTKEQLFERMCMALGGRAAEAISFS--RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQE 681 The following BLAST results are available for this feature:
BLAST of CX288518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288518 ID=CX288518; Name=CX288518; organism=Citrus clementina; type=EST; length=521bpback to top |