CX288666

Overview
NameCX288666
Unique NameCX288666
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length342
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:710..1052. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.194e-46
Identity = 95/114 (83.33%), Postives = 101/114 (88.60%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKK-DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNHFV EFKRK KK   +   RALRR  TACERAKRTLSS AQT+IEIDSLYEGIDFY++ITRARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVSEFKRKFKKISPAERARALRRSPTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQD 307          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.214e-45
Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V HF +EFKRKNK KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L+E IDF +TITRARFEEL
Sbjct:  198 LIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTEEFKRKNKGKDLSSNLRALRRLRTACERAKRTLSSAAQATIEIDALFENIDFQATITRARFEEL 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.214e-45
Identity = 89/114 (78.07%), Postives = 104/114 (91.23%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNRMV HFV+EFKRK+KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+Y+ I+RARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRMVGHFVEEFKRKHKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSD 307          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.585e-45
Identity = 89/113 (78.76%), Postives = 101/113 (89.38%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDL GGTFDVS+LTIEEGIFEVK+T+ DTHLGGEDFDNRMV H   EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q  IEIDSL+EGID+Y+++TRARFEELN D
Sbjct:  196 LIFDLVGGTFDVSVLTIEEGIFEVKSTSRDTHLGGEDFDNRMVTHSSPEFKRKHKKDITPNKRAVRRLRTACERAKRTLSSSTQAKIEIDSLFEGIDYYTSVTRARFEELNSD 308          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 2.070e-45
Identity = 91/114 (79.82%), Postives = 103/114 (90.35%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIE+GIFEVKATAGDTHLGGEDFDNR+VN  V++FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  T++RARFEEL +D
Sbjct:  208 LIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCID 321          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.070e-45
Identity = 91/114 (79.82%), Postives = 103/114 (90.35%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVSLLTIE+GIFEVKATAGDTHLGGEDFDNR+VN  V++FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  T++RARFEEL +D
Sbjct:  208 LIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCID 321          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.704e-45
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV+ATAGDTHLGGEDFDNRMV HFV+EFKRK KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+Y+ I+RARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRMVAHFVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSD 307          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.704e-45
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI+EG +FEV+ATAGDTHLGGEDFDNRMV HFV+EFKRK KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+Y+ I+RARFEEL  D
Sbjct:  194 LIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRMVAHFVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSD 307          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.866e-45
Identity = 90/113 (79.65%), Postives = 103/113 (91.15%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMD 341
            LIFDLGGGTFDVS+LTI++GIFEVKATAGDT    EDFDNR+VNHFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+EGIDFY++ITRARFEEL  D
Sbjct:  195 LIFDLGGGTFDVSILTIDDGIFEVKATAGDT-TWVEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSD 306          
BLAST of CX288666 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.866e-45
Identity = 86/111 (77.48%), Postives = 101/111 (90.99%), Query Frame = 3
Query:    3 LIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEEL 332
            LIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+VNHF +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + ++EID+LYEG DFYS ++RARFEEL
Sbjct:  193 LIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEEL 303          
The following BLAST results are available for this feature:
BLAST of CX288666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_AJECA3.194e-4683.33Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP74_TRYBB1.214e-4582.88Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP74_ANOAL1.214e-4578.07Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP72_PARLI1.585e-4578.76Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP70_PLAFA2.070e-4579.82Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB2.070e-4579.82Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP72_ANOAL2.704e-4578.95Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL2.704e-4578.95Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP71_CERAE7.866e-4579.65Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP68_DROME7.866e-4577.48Heat shock protein 68 OS=Drosophila melanogaster G... [more]

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Properties
Property NameValue
Genbank descriptionC02003A05SK IF1 Citrus clementina cDNA clone C02003A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288666 ID=CX288666; Name=CX288666; organism=Citrus clementina; type=EST; length=342bp
TGTTGATCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCGTTGCTCACT
ATTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCT
TGGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGT
TTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACCCTAGAGCTCTTAGG
AGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGC
CCAGACTACAATTGAGATTGATTCTTTGTATGAGGGTATTGACTTCTACT
CAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATC
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