CX289055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO4_HUMAN (Protein argonaute-4 OS=Homo sapiens GN=EIF2C4 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 9.260e-22 Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HY VLWD+N FTAD LQ LT LC+TY RCTRSVSI PAYYA L AFRAR+++ + DS Sbjct: 757 GIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDS 826
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO4_CHICK (Protein argonaute-4 OS=Gallus gallus GN=EIF2C4 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.260e-22 Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HY VLWD+N FTAD LQ LT LC+TY RCTRSVSI PAYYA L AFRAR+++ + DS Sbjct: 690 GIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDS 759
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO3_BOVIN (Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20 Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLT-NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 210 GIQGTSRP+HYHVLWD+N FTAD LQ LT +TY CTRSVSI PAYYAHL AFRAR+++ + DS Sbjct: 756 GIQGTSRPSHYHVLWDDNCFTADELQLLTYQPSAHTYVHCTRSVSIPAPAYYAHLVAFRARYHLVDKERDS 826
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: TAG76_CAEEL (Putative protein tag-76 OS=Caenorhabditis elegans GN=tag-76 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.211e-18 Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 192 G+QGTSRPA YHVL DE KFTAD +QS+T +C+TY RCTRSVSI P YYA L A RAR +++ Sbjct: 903 GVQGTSRPARYHVLLDECKFTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCHVK 966
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO17_ORYSJ (Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.258e-17 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 7 QGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPET 201 QGT RP +YHVLWDEN F A Q LTN LCYT A CT+S+S+V P +YA L + RAR Y++P + Sbjct: 773 QGTKRPRYYHVLWDENDFLAGSFQELTNYLCYTSATCTQSISVVAPVHYARLLSSRARCYIKPRS 837
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 192 G+ GTSRP HY+ L DE+ F +D LQ L NLC+ +ARCT+ VS+ P YYA LAA+R R Y E Sbjct: 926 GLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYE 989
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 6.428e-15 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 192 G GTSRP HY+ L DE+ F +D LQ L NLC+ +ARCT+ VS+ P YYA LAA+R R Y E Sbjct: 960 GEVGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYE 1023
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.068e-13 Identity = 46/121 (38.02%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRP---LPALKENVKRVMFYC 354 G+ GT+RP HYHVL DEN FT D LQ L +NL Y Y R T ++S V P YAHLAA + ++ + + S GA RP LP L +V++ MF+C Sbjct: 790 GMIGTTRPTHYHVLHDENNFTPDDLQELVHNLSYVYQRSTTAISGVAPICYAHLAAAQVSQFVRLDDAASEGSGDG---------------------GAPPRPVPELPRLHPDVRQSMFFC 889
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12 Identity = 45/122 (36.89%), Postives = 58/122 (47.54%), Query Frame = 1 Query: 1 GIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA----RFYMEPETSDSXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAVRPLPALKENVKRVMFYC 354 G+ GT+RP HYH+L DE F+AD LQ L ++L Y Y R T ++S+V P YAHLAA + +F ETS S A V LP L V+ MF+C Sbjct: 802 GMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAG-------------------SAPVPELPRLHNKVRSSMFFC 904
BLAST of CX289055 vs. ExPASy Swiss-Prot
Match: AGO1_SCHPO (Protein argonaute OS=Schizosaccharomyces pombe GN=ago1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 4 IQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF 183 +QG S P HY VL DE + D Q+L NLCY YAR T +VS+VPP YYAHL + AR+ Sbjct: 737 LQGVSVPVHYTVLHDEIQMPPDQFQTLCYNLCYVYARATSAVSLVPPVYYAHLVSNLARY 796 The following BLAST results are available for this feature:
BLAST of CX289055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289055 ID=CX289055; Name=CX289055; organism=Citrus clementina; type=EST; length=506bpback to top |