CX293823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.896e-17 Identity = 48/141 (34.04%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 36 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPL 455 K+L +H E I+ + +K+ R+ K+E + ++++K +QSV +IG+ + +D IV++S+G YVV S +D+EKL + V L + ++ LP E D + + + +V+Y+ VGGL Q +E+RE++ELPL Sbjct: 46 KRLQRHLEYIQLQEEYIKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPL 186
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.224e-17 Identity = 44/140 (31.43%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 48 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 Q +++ES R ++ ++E K + +++ L++ I+G + +D+ R++V++S+GPR++V V+ L +G R L+ +L I+ LP D VY M D +Y +GGL QI E+RE++ELP+ P+ Sbjct: 38 QIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPD 177
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17 Identity = 47/145 (32.41%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.229e-16 Identity = 46/145 (31.72%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 54 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 ++++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 24 EDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 168
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.229e-16 Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 36 KKLLQHKEIESRVRSVKE----NLRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 K LQH + R++ K L A + E N ++L+ LQ G +GEV++ + +++VK +YVV +D KLT TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 34 KYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
BLAST of CX293823 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.605e-16 Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 45 LQH-KEIESRVRSVKENLR---AAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPE 467 LQH E++ ++R NL A + E N ++L+ LQ G +GEV++ + +++VK +YVV +D K+T TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PE Sbjct: 37 LQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185 The following BLAST results are available for this feature:
BLAST of CX293823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293823 ID=CX293823; Name=CX293823; organism=Citrus clementina; type=EST; length=469bpback to top |