CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_RAT (Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 63/154 (40.91%), Postives = 98/154 (63.64%), Query Frame = 3 Query: 75 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 A + + K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYD+T++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK Sbjct: 9 AAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_MOUSE (Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 63/154 (40.91%), Postives = 98/154 (63.64%), Query Frame = 3 Query: 75 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 A + + K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYD+T++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK Sbjct: 9 AAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 63/144 (43.75%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYDIT++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK Sbjct: 18 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAK 161
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.850e-29 Identity = 63/146 (43.15%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDA-RKVTAEEAQAYAQENGLFFMETSAKT 539 KL+L+GD G GKS L+LRF G F +TIG F +T+ ++ +K +IWDTAGQER+ ++ YYRGA ++VYD+T+++SF + W++ ++ + N+ L GNKAD+ ++ R V + QA A E G+ F ETSAKT Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKT 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + + N+V+ L GNK DL R+VT EA +AQEN L F+ETSA T Sbjct: 10 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + + N+V+ L GNK DL R+VT EA +AQEN L F+ETSA T Sbjct: 10 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDTAGQER+ S+ YYRGAA A++VYDIT++ ++ W+ + + + N+V+ L GNK DL R+VT EA +AQEN L F+ETSA T Sbjct: 10 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALT 154
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 63/152 (41.45%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 87 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQE-STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 N ++ K++LLGD G GK+ +++F G F+ +T+G ++ + V+ A VK +IWDTAGQER+ S+ YYR A A +++YDITNQ+SF+ + W+ E+ ++V+ L GNKAD+ R + +E+ + A+E G+ FMETSAKT Sbjct: 25 NYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKT 176
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 65/146 (44.52%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQE-STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKT 539 K++L+GD G GK+ L++RF G F+ ST+G F ++ + V+ VK +IWDTAGQER+ S+ YYR A A +++YD+TN+ASF+ + W+ E+Q ++V+ L GNK D R V E+A+ A++ GL FMETSAKT Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKT 210
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB21_CANFA (Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 63/144 (43.75%), Postives = 95/144 (65.97%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAK 536 K+VLLG+ GK+SLVLR+ + +F + +T+ A+F ++ L + V IWDTAGQER+H+L P+YYR + AI+VYDIT++ SF++ K WV+EL+ + + + GNK DL R V+ +EA++YA+ G TSAK Sbjct: 19 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |