CX293826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 6.563e-35 Identity = 68/147 (46.26%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +T Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDST 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.572e-35 Identity = 69/147 (46.94%), Postives = 101/147 (68.71%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNK+DL R V E AQA+ + GL F+ETSA +T Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALEST 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.119e-34 Identity = 68/147 (46.26%), Postives = 102/147 (69.39%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K+VL+GD G GKS+L+ RF + +F +STIG F +++L V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T ++FE ++W++EL+ +PN+V+ L GNK+DL V +E +A+A+ L+FMETSA +T Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALEST 162
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.462e-34 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 3 Query: 78 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL------DARKVTAEEAQAYAQENGLFFMETSAKT 539 T + K+VLLG+ GKSS+VLRFV F E +E TIGAAF ++ + + +KFEIWDTAGQER+ LAPMYYR A AA++V+D+TN+ SF +A+ WV+EL + ++V+AL GNK DLL + R + A Q + L + E SAKT Sbjct: 5 TAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKT 164
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 1.462e-34 Identity = 69/143 (48.25%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSA 533 K+VL+GD G GKS+L+ RF K +F +STIG F ++TL ++ +K +IWDTAGQERY ++ YYRGA A+IVYDI+ +S+E W+ EL+ + N+ + L GNK+DL R V EE++ +AQEN L F ETSA Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSA 157
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 1.462e-34 Identity = 67/143 (46.85%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSA 533 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSA 155
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 145.591 bits (366), Expect = 1.462e-34 Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K+VL+GD G GKS+++ RF + +F +STIG F ++T V T+K +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ +AGNK+DL R V E+ Q+ A++ GL F+ETSA AT Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEAT 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.910e-34 Identity = 68/147 (46.26%), Postives = 103/147 (70.07%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R V+ ++ A +++ GL F+ETSA AT Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEAT 160
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.494e-34 Identity = 66/146 (45.21%), Postives = 102/146 (69.86%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTA 542 K+VL+GD G GKS+++ RF + F +STIG F +++L + T+K +IWDTAGQERY ++ YYRGA A++VYDIT + SF+ +W++EL+ + ++V+ + GNK+DL+ R V+ +E +A A++ GLFF+ETSA A Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEA 159
BLAST of CX293826 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.494e-34 Identity = 67/147 (45.58%), Postives = 99/147 (67.35%), Query Frame = 3 Query: 105 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTAT 545 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NMV+ L GNK+DL R+V EE +A+A+E+GL FMETSAKTA+ Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTAS 154 The following BLAST results are available for this feature:
BLAST of CX293826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293826 ID=CX293826; Name=CX293826; organism=Citrus clementina; type=EST; length=546bpback to top |