CX293877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.266e-28 Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 68 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEE--KND-KWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 R NV DP+S+D W D F + S A N R+DWKET AHVF ADLPG+R G +L ISGER++E + KND +WH V+RSSGKF RRFRLP A+V+QV ASM+NGVLTVT AI IS Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPIS 149
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.121e-26 Identity = 60/134 (44.78%), Postives = 87/134 (64.93%), Query Frame = 2 Query: 62 GGRRTNVFDPVSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 GG +PVS+D+ +PF D +A APS+A + + A +DWKETA AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRV+RSS +F+R RLP NA + V A+++NGVLT+T Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 188 ARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 AR+DWKET + HV D+PGL+ R+L++SGER KE E+K D WHRV+RS GKF R+FRLP N ++ VKA +ENGVLT+T Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 182 ANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 ++AR+DWKET + HV D+PGL+ R+L++SGER KE ++K D WHRV+RS GKF R+F+LP N ++ VKA MENGVLT+T Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.195e-23 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 2 Query: 164 RETS-QFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 454 R+TS + AR+DWKETA+ H D+PGL+ +L++SGER +E E+K D+WHRV+RS GKF R+F+LPDN +E VKA +ENGVLT+ Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.170e-22 Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 2 Query: 80 VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 +FD ++ D W+PF F ++ +A A +TS FAN I+ +ETA+A+VF+ADLP G++ G +L I+GERS EEK + H ++RS F RF LPD+A V+ V+ASM+ G+LTVT Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.573e-21 Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = 2 Query: 290 ILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXXAIEIS 508 ILQISGER+ E E+KND WHRV+RSSGKF+R FRLPDNAKV+QVKASMENGVLTVT AIEIS Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEIS 73
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 7.307e-19 Identity = 61/158 (38.61%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 5 LSI*LASQFAIMSLIPSIFGG--RRTNVFDPVSLDVWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEH--EEKN--DKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 454 +++ LAS A +L+P GG R V + L DPF L + P + + + AR+DW+ET AH D+PG+R R+L+ISGER +E E+K D WHR +RS G+F R+ RLPDNA ++ + AS++NGVLTV Sbjct: 16 IAVVLASTAADGALLPWFGGGGARDEAVPELGLLAAADPF-----RILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.010e-17 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 149 APSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEHEEKND--KWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 A ++A E + A AR DWKET +AHV D+PG+R R+L++SGER ++E E + D +WHR +R++G+F RRFR+P A V +V A +++GVLTVT Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.874e-15 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 182 ANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 454 + A IDW E+ +H+FK ++PG G +L I GE KE +++N WH +R + +FLRR LP+N KV+QVKA +ENGVLTV Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115 The following BLAST results are available for this feature:
BLAST of CX293877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293877 ID=CX293877; Name=CX293877; organism=Citrus clementina; type=EST; length=509bpback to top |