CX293877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 146 NAPSSA--RETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKND-KWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 N PS A R+ A D E A+VF D+PG++ +L +SG+R ++++E K+ R++R GKF+R+F+LPDNA +E++ A+ +GVL VT Sbjct: 30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVT 136
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 197 DWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 D KE A+ F D+PGL R+L ISGER +E E ++ K+ R++R GKF+R+F LPDNA ++++ A +GVLTVT Sbjct: 56 DVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRRE-EREDAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVT 141
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 182 ANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQI--------------SGERSKEHEEKND--KWHRVQRSSGK---FLRRFRLPDNAKVEQVKASMENGVLTVT 457 A +DW+ET AHVF+ DLPGL G IL++ +G+ S E EE+ND +WH +R++G+ + +FRLP++A ++ A M +GVLTVT Sbjct: 25 ARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVT 135
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11 Identity = 42/119 (35.29%), Postives = 57/119 (47.90%), Query Frame = 2 Query: 116 FDGFLSSALTNAPSSARETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGER-----SKEHE-EKNDKWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 454 F G L P S A A +DW ET +HV + ++PGL G +L + G KE E EK+ WH +R +F R LP +VEQ++AS++NGVLTV Sbjct: 6 FGGPFRRILYGRPFPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTV 124
BLAST of CX293877 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.608e-11 Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 146 NAPSSA--RETSQFANARIDWKETAQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEHEEKND-KWHRVQRSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 457 N PS R+ A D E A+ F D+PG++ +L +SGER +E++E K+ R++R GKF+R+F+LP+NA ++++ A +GVL VT Sbjct: 29 NNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVT 135 The following BLAST results are available for this feature:
BLAST of CX293877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293877 ID=CX293877; Name=CX293877; organism=Citrus clementina; type=EST; length=509bpback to top |