CX293891

Overview
NameCX293891
Unique NameCX293891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.443e-24
Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S + + ++ + GMNVARLN SHG H  H+ TI  V+E    F       + VAI LDTKGPE+R+G +       + LK+G     T+         E+ + V+Y + +  ++VG  + VD G++SL VK K KD V   V +GG L S++
Sbjct:   38 PTIARNTGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGGMLGSKK 206          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 108.997 bits (271), Expect = 1.308e-23
Identity = 65/169 (38.46%), Postives = 94/169 (55.62%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S EM+ ++ + GMNVARLN SHG H  H +TI  V+E    F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    VEVG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKGADFLVTEVENGGSLGSKK 207          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.709e-23
Identity = 59/154 (38.31%), Postives = 89/154 (57.79%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+TKIVCT+GP+ +S + I +L E+GM+VARLN SHGDH  H++    V+E  ++   +AV I+ D +GP++R G       + + G+    T+     T D VS  Y +   D + GD LLVD G + L   S   + V C VV+GG + + +
Sbjct:    3 RRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVRE-AAEKTGRAVGILADLQGPKIRLGRFTDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNK 155          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_CHLTR (Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE=3 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23
Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 3
Query:   51 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVND-VEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHL 512
            +TKI+CTIGP+T++ EM+ KL + GMNVARLN SHG H SH +TI ++KE   +     +AIMLDTKGPE+R G V  PI ++ G       K  + ++++    Y   V   V     +L+D G +   V +  + +V+    + GE+KS + L
Sbjct:    4 RTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREK-RQVPLAIMLDTKGPEIRLGQVESPIKVQPGDRLTLVSKEILGSKESGVTLYPSCVFPYVRERAPVLIDDGYIQAVVVNAQEHMVEIEFQNSGEIKSNKSL 157          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD-VPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+ KIVCT+GP+T+S E+I  L E GM+VARLN SHGD+A H+   + V+   S    +AV ++ D +GP++R G     P    +G+    T+     + D VS  Y     D  VGD +LVD G + L V     D V C VV+GG + + +
Sbjct:    3 RRGKIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVR-VASDATGRAVGVLADLQGPKIRLGRFATGPTYWADGETVRITVADCEGSHDRVSTTYKKLAEDAAVGDRVLVDDGKVCLVVDGIEGDDVICTVVEGGPVSNNK 155          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_CLOAB (Pyruvate kinase OS=Clostridium acetobutylicum GN=pyk PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 4.972e-23
Identity = 58/155 (37.42%), Postives = 94/155 (60.65%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV-PQPIILKEGQEFNFTIKRGVSTEDT-VSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            +KTK++ T+GP++ + E++    + GMN +R N SHGDHA H   I LVK+  ++  +K VAI LDTKGPE+R+GD  P  + L++G +F       +  + T  S++Y D   DV+ G+ +L+D G++ L V++     V C V + G + S +
Sbjct:    2 QKTKMIFTVGPASETEEIVTAFIKAGMNASRHNFSHGDHAEHGGRIALVKKVRAKL-NKPVAICLDTKGPEIRTGDFNPSKLELQKGSKFTIVCGEEIVGDATKCSISYKDLYKDVKPGNTILIDDGLVGLTVEAIEGTNVICTVANTGLVGSHK 155          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 64/169 (37.87%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S EM+ ++ + GMNVARLN SHG H  H +TI  V+     F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    VEVG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKGADYLVTEVENGGSLGSKK 207          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 70/169 (41.42%), Postives = 99/169 (58.58%), Query Frame = 3
Query:   36 PNARR--KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP--QPIILKEGQEF----NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS--KTKDLVKCIVVDGGELKSRRHL 512
            PN  R  KTKIVCT+GPS+ +  M+ KL   GMNVAR N SHG H  HQ+T+D +K    Q      A+MLDTKGPE+R+G +   +PI LKEGQE     ++TIK     E+ +S++Y   V D++ G+ +L   G ++L V S       V+C   +   L  R+++
Sbjct:   14 PNDGRIPKTKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLK-IAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIK---GNEEMISMSYKKLVMDLKPGNTILCADGTITLTVLSCDPPSGTVRCRCENTATLGERKNV 178          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_COREF (Pyruvate kinase OS=Corynebacterium efficiens GN=pyk PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.108e-22
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+TKIVCT+GP+ +S + I +L ++GM+VARLN SHGDH  H++    V+E   +   +AV I+ D +GP++R G   +   + + G+    T+     T D VS  Y +   D   GD LLVD G + L   S   + V C V +GG + + +
Sbjct:    3 RRTKIVCTLGPAVASADGILRLVQDGMDVARLNFSHGDHPDHEQNYKWVREATDK-TGRAVGILADLQGPKIRLGRFKEGSTVWETGETVRITVDDVEGTHDRVSTTYKNLAKDARPGDRLLVDDGKVGLVCVSVEGNDVICEVTEGGPVSNNK 155          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.889e-22
Identity = 63/169 (37.28%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S E++ ++ + GMNVARLN SHG H  H +TI  V+     F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    VEVG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVKEKGADFLVTEVENGGSLGSKK 207          
The following BLAST results are available for this feature:
BLAST of CX293891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_CHICK3.443e-2438.46Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYM_MOUSE1.308e-2338.46Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_CORGL1.709e-2338.31Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]
KPYK_CHLTR2.915e-2339.35Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE... [more]
KPYK_MYCIT3.807e-2338.96Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_CLOAB4.972e-2337.42Pyruvate kinase OS=Clostridium acetobutylicum GN=p... [more]
KPYM_RAT8.480e-2337.87Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYC_SOLTU8.480e-2341.42Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYK_COREF1.108e-2237.01Pyruvate kinase OS=Corynebacterium efficiens GN=py... [more]
KPYM_FELCA1.889e-2237.28Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05002B09SK FlavRip1 Citrus clementina cDNA clone C05002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293891 ID=CX293891; Name=CX293891; organism=Citrus clementina; type=EST; length=513bp
ATGGTCAGTGCACACCTGGAAAGGGAGTTGTAGGTCCAAATGCTAGAAGA
AAAACGAAGATAGTGTGTACAATTGGTCCTTCCACAAGCTCACGGGAAAT
GATATGGAAACTGGCAGAAGAGGGAATGAATGTGGCACGTTTAAATATGT
CGCATGGAGACCATGCATCACACCAGAAAACTATTGATCTCGTCAAAGAA
TACAATTCTCAATTTGAAGACAAGGCTGTAGCCATAATGCTGGACACCAA
GGGTCCTGAGGTTAGGAGTGGAGATGTACCTCAACCAATCATCCTGAAGG
AGGGTCAGGAATTTAATTTTACTATCAAAAGAGGGGTTAGCACAGAAGAT
ACTGTTAGTGTGAACTATGATGACTTTGTGAATGACGTAGAGGTTGGAGA
CATACTACTGGTAGATGGTGGAATGATGTCATTAGCTGTGAAGTCAAAGA
CAAAGGATCTGGTTAAATGCATAGTAGTTGATGGCGGTGAGCTAAAATCA
AGACGTCATTTAA
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