CX293891

Overview
NameCX293891
Unique NameCX293891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BORBU (Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.955e-19
Identity = 52/153 (33.99%), Postives = 87/153 (56.86%), Query Frame = 3
Query:   54 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHL 512
            TKIV TI       E I  L + G+NV RLN +H  H    K ID V++ +++     +A+M+DTKGPEVR+ ++  PII+K G +   +    ++  +    NYD FV +V  G  +L+D G + + V +K  D + C + + G++K+++ +
Sbjct:    6 TKIVATISDLRCEPEHIKDLHDAGVNVIRLNTAHQSHEDTIKVIDNVRKISNK-----IALMIDTKGPEVRTANIENPIIVKTGDKVIISTSP-INEPNNFQTNYDGFVKEVPQGSKVLIDDGELEMTVVAKLPDRLICEIKNDGQIKNKKSI 152          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_THELI (Pyruvate kinase (Fragment) OS=Thermococcus litoralis GN=pki PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.553e-19
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 3
Query:   51 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP-QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            KTKI+ TIGP++  +E I K+ + GM+VAR+N SHG    H KTI+ V++   + E + VAI+ D  G ++R G +    + L++G +   T +     E T+ V + D    V  GD + +  G + L V+   ++ V+C+VV+GG L S +
Sbjct:   11 KTKIIATIGPASKQKESIKKMIKAGMSVARINFSHGTLEEHAKTIETVRDVAEKLE-RRVAILGDLPGLKMRVGKIKGDSVTLRKGDKVVLTTRDIEGDETTIPVEFKDLPKLVSKGDTIYLSDGYIMLRVEEVRENEVECVVVNGGILFSHK 162          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_SYNY3 (Pyruvate kinase 2 OS=Synechocystis sp. (strain PCC 6803) GN=pyk2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.553e-19
Identity = 56/159 (35.22%), Postives = 93/159 (58.49%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG---DVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVK---SKTKDLVKCIVVDGGELKSRR 506
            R+TKIV TIGP+T S+E++ +L + G    RLN SHGDHA HQ++I L+++   +  ++ V I+ D +GP++R G   +    + LK G  +  T +    TE   S++Y+   ++V  G  +L+D G + + V+   +  +DL  C V+ GG L S +
Sbjct:    8 RRTKIVATIGPATQSKEVLRQLIQAGATTFRLNFSHGDHAYHQQSIRLIRQIAFEL-NQPVGILQDLQGPKIRVGKFLNDAGSVQLKNGDPYTLTSRPVECTETISSISYEYLADEVPSGARILLDDGKLEMLVEEVDTVARDL-HCRVIVGGTLSSNK 164          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.335e-19
Identity = 66/176 (37.50%), Postives = 92/176 (52.27%), Query Frame = 3
Query:   18 GKGVVGPNAR-RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFT-----------IKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKD-LVKCIVVDGGELKSRR 506
            G  +  P A+ R  +IVCTIGPST S E +  L + GM+VAR+N SHG H  HQ TI+ V+   ++     + I LDTKGPE+R+G      + K+G E +F                V T++   ++Y    N V  G  + VD G+M+L V SK  D  +KC V +   L  RR
Sbjct:    9 GLSIFEPVAKHRANRIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAEL-GLHIGIALDTKGPEIRTG------LFKDG-EVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVSKEDDRTLKCHVNNHHRLTDRR 176          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.355e-19
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R  KI+CTIGPS+ S E++  L + G+NVAR+N SHG +  HQKTID V++  S+     V I LDTKGPE+R+G  P   ++++  +    T       + T    Y D++N    V VG  + VD G++ L V   +   ++C+  +   + +R+
Sbjct:   19 PALFRSNKIICTIGPSSQSVEVLKDLMKAGLNVARMNFSHGTYEYHQKTIDNVRKAASEL-GIHVGIALDTKGPEIRTGLFPAGDVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLDLIVVKISGKDIECVAQNTHTISNRK 178          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.688e-19
Identity = 66/176 (37.50%), Postives = 91/176 (51.70%), Query Frame = 3
Query:   18 GKGVVGPNAR-RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFT-----------IKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKD-LVKCIVVDGGELKSRR 506
            G  +  P A+ R  +IVCTIGPST S E +  L + GM+VAR+N SHG H  HQ TI+ V+   ++     + I LDTKGPE+R+G      + K+G E  F                V T++   ++Y      V VG  + VD G+M+L V SK  D  +KC V +   L  RR
Sbjct:    9 GLSIFEPVAKHRANRIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAEL-GLHIGIALDTKGPEIRTG------LFKDG-EVTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMTLRVLSKEDDRTLKCHVNNHHRLTDRR 176          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 9.703e-19
Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD-VPQPIILKEGQEFNFTIKRGVS---TEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS-KTKDLVKCIVVDGGELKSRR 506
            R  +I+CTIGPST S E +  L + GM+VAR+N SHG H  HQ TI+ V++  ++     +AI LDTKGPE+R+G  V    +++ G     T     +   T+D   ++Y +    V  G+ + +D G++ L V+S + +  ++C V +   +  RR
Sbjct:   20 RAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAEL-GVNIAIALDTKGPEIRTGQFVGGDAVMERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTISDRR 176          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_CANGA (Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.655e-18
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 3
Query:    6 QCTPGKGVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG----DVPQPIILKEGQEFNFTIKRGVSTEDTVS-VNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKD-LVKCIVVDGGELKSRR 506
            + TPGK V      RKT I+ TIGP T++ + +  L + G+N+ R+N SHG +  HQ  ID  ++    +  + +AI LDTKGPE+R+G    DV  PI       F    K   + +D +  V+Y +    ++ G ++ VD G++S  V     D  +K   ++ G++ S +
Sbjct:   12 EVTPGKDV------RKTAIIGTIGPKTNNVDTLVALRKAGLNIVRMNFSHGSYEYHQSVIDNARKSEQVYPGRPLAIALDTKGPEIRTGTNVDDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVIQPGKVIYVDDGVLSFEVLEVVDDKTLKVKSLNAGKISSHK 178          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.687e-18
Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRG---VSTED----------TVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P A R T I+ TIGP++ S + + ++ + GMN+ARLN SHG H  H ++I  ++E    F       + VAI LDTKGPE+R+G      +L+ G E    I +G   + T D          TV V+Y +    V VG  + +D G++SL V+    + +   V  GG L SR+
Sbjct:   82 PVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTG------VLQGGPESEVEIVKGSQVLVTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLISLVVQKIGPEGLVTEVEHGGILGSRK 250          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.073e-17
Identity = 61/175 (34.86%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRG---VSTED----------TVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P A R T I+ TIGP++ S + + ++ + GMN+ARLN SHG H  H ++I  ++E    F       + VAI LDTKGPE+R+G      +L+ G E    I +G   + T D          TV V+Y +    V VG  + +D G++SL V+    + +   V  GG L +R+
Sbjct:   82 PVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSHEYHAESIANIREAAESFATSPLSYRPVAIALDTKGPEIRTG------VLQGGPESEVEIVKGSQVLVTVDPKFRTRGDAKTVWVDYHNITQVVAVGGRIYIDDGLISLVVRKIGPEGLVTEVEHGGFLGNRK 250          
The following BLAST results are available for this feature:
BLAST of CX293891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_BORBU1.955e-1933.99Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=... [more]
KPYK_THELI2.553e-1935.29Pyruvate kinase (Fragment) OS=Thermococcus litoral... [more]
KPYK2_SYNY32.553e-1935.22Pyruvate kinase 2 OS=Synechocystis sp. (strain PCC... [more]
KPYK1_TRYBB3.335e-1937.50Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_TRYBO4.355e-1935.40Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]
KPYK2_TRYBB5.688e-1937.50Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_LEIME9.703e-1934.81Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYK2_CANGA1.655e-1832.37Pyruvate kinase 2 OS=Candida glabrata GN=PYK2 PE=3... [more]
KPYR_RAT3.687e-1835.43Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYR_MOUSE1.073e-1734.86Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]

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Properties
Property NameValue
Genbank descriptionC05002B09SK FlavRip1 Citrus clementina cDNA clone C05002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293891 ID=CX293891; Name=CX293891; organism=Citrus clementina; type=EST; length=513bp
ATGGTCAGTGCACACCTGGAAAGGGAGTTGTAGGTCCAAATGCTAGAAGA
AAAACGAAGATAGTGTGTACAATTGGTCCTTCCACAAGCTCACGGGAAAT
GATATGGAAACTGGCAGAAGAGGGAATGAATGTGGCACGTTTAAATATGT
CGCATGGAGACCATGCATCACACCAGAAAACTATTGATCTCGTCAAAGAA
TACAATTCTCAATTTGAAGACAAGGCTGTAGCCATAATGCTGGACACCAA
GGGTCCTGAGGTTAGGAGTGGAGATGTACCTCAACCAATCATCCTGAAGG
AGGGTCAGGAATTTAATTTTACTATCAAAAGAGGGGTTAGCACAGAAGAT
ACTGTTAGTGTGAACTATGATGACTTTGTGAATGACGTAGAGGTTGGAGA
CATACTACTGGTAGATGGTGGAATGATGTCATTAGCTGTGAAGTCAAAGA
CAAAGGATCTGGTTAAATGCATAGTAGTTGATGGCGGTGAGCTAAAATCA
AGACGTCATTTAA
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