CX293891

Overview
NameCX293891
Unique NameCX293891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.486e-32
Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPII-LKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVK--SKTKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S EMI KL   GMNVARLN SHG H  H+  ID +++   +  DK VAI+LDTKGPE+R+ ++   II L+ G E   ++     T +  SV Y++ +NDV+VG  +L+D G++ L VK     K  VKC +++ GELK+++
Sbjct:    2 RKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRL-DKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.486e-32
Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPII-LKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVK--SKTKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S EMI KL   GMNVARLN SHG H  H+  ID +++   +  DK VAI+LDTKGPE+R+ ++   II L+ G E   ++     T +  SV Y++ +NDV+VG  +L+D G++ L VK     K  VKC +++ GELK+++
Sbjct:    2 RKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRL-DKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.705e-31
Identity = 72/156 (46.15%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPII-LKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS--KTKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S EM+ KL + GMNVARLN SHGD A H+  ID +++ + +   K VAI+LDTKGPE+R+ ++   +I L++G E   ++     T +  SV Y++ +NDVE G  +L+D G++ L VKS  K    V C V++ GELK+++
Sbjct:    2 RKTKIVCTIGPASESEEMLEKLIKAGMNVARLNFSHGDQAEHKARIDTIRKVSKRL-GKTVAILLDTKGPEIRTHNMKDGLIELEKGSEVTVSMTEVEGTPEKFSVTYENLINDVEEGSYILLDDGLIELQVKSIDKANGEVLCDVLNTGELKNKK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.478e-31
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQP-IILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVK--SKTKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S EM+ KL   GMNVARLN SHG H  H+  ID +++   +  +K + ++LDTKGPE+R+ ++    I+L++G+E   ++     T +  SV Y++ +NDV +G  +L+D G++ L VK  +K K  VKC +++ GELK+++
Sbjct:    2 RKTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRL-NKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMNEVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.478e-31
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQP-IILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVK--SKTKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S EM+ KL   GMNVARLN SHG H  H+  ID +++   +  +K + ++LDTKGPE+R+ ++    I+L++G+E   ++     T +  SV Y++ +NDV +G  +L+D G++ L VK  +K K  VKC +++ GELK+++
Sbjct:    2 RKTKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRL-NKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMNEVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYA_TOBAC (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 7.919e-29
Identity = 73/164 (44.51%), Postives = 101/164 (61.59%), Query Frame = 3
Query:   33 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPIILK--EGQEFNFTIKR--GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHL 512
            G  + R+TK++CTIGP+T   E + +LAE GMNVAR+NM HG    H+  I+ ++  N + +  AVAIM+DT+G E+  GD+      K  +G+ +NFT++       E TV+VNYD F  DV+VGD LLVDGGM+   V  K    VKC+  D G L  R +L
Sbjct:  109 GFRSTRRTKLICTIGPATCGFEQLERLAEGGMNVARINMCHGTREWHRMVIERLRRLNEE-KGFAVAIMMDTEGSEIHMGDLGGASSAKAEDGEIWNFTVRSFDPPLPERTVTVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRANL 271          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 62/156 (39.74%), Postives = 100/156 (64.10%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK--TKDLVKCIVVDGGELKSRR 506
            RKTKIVCTIGP++ S E++ +L E GMNVARLN SHG+HA H+  ID +++  ++ + K V I+LDTKGPE+R+  +    + L  GQ+ + ++ +     D  SV+YD  + DV  G ++L+D G++ L V  K   + L+  ++++ G L + +
Sbjct:    2 RKTKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKV-AREKGKVVGILLDTKGPEIRTHSMMNGKLELVTGQKIDISMTQVEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARGLIHTLIINSGSLSNNK 156          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 68/152 (44.74%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP--QPIILKEGQEFNFTI-KRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGEL 494
            +KTKIVCTIGP T S EM+ K+ + GMNV RLN SHGD+A H + I  ++   S+   KA AI+LDTKGPE+R+  +     + LK GQ F FT  K  V   + V+V Y+ F +D+ VG+ +LVD G++ + V +   + V C V++ G+L
Sbjct:    2 KKTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKA-AILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 68/152 (44.74%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP--QPIILKEGQEFNFTI-KRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGEL 494
            +KTKIVCTIGP T S EM+ K+ + GMNV RLN SHGD+A H + I  ++   S+   KA AI+LDTKGPE+R+  +     + LK GQ F FT  K  V   + V+V Y+ F +D+ VG+ +LVD G++ + V +   + V C V++ G+L
Sbjct:    2 KKTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKA-AILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDL 152          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.547e-27
Identity = 66/157 (42.04%), Postives = 103/157 (65.61%), Query Frame = 3
Query:   45 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPII-LKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCI--VVDGGELKSRR 506
            +RKTKIVCTIGP++ S + + +L E GMNVARLN SHGDH  H + I  ++E  ++   + VAI+LDTKGPE+R+ ++    I LKEG +   ++   + T + +SV Y   ++DV VG  +L+D G++SL V +  K   + +  V++GG LK+++
Sbjct:    2 KRKTKIVCTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIRE-AAKRTGRTVAILLDTKGPEIRTHNMENGAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKK 157          
The following BLAST results are available for this feature:
BLAST of CX293891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_STAA84.486e-3246.79Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA34.486e-3246.79Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_STAS11.705e-3146.15Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_STAES6.478e-3142.95Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ6.478e-3142.95Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYA_TOBAC7.919e-2944.51Pyruvate kinase isozyme A, chloroplastic OS=Nicoti... [more]
KPYK_BACPY1.951e-2739.74Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYK1_SALTY1.951e-2744.74Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI1.951e-2744.74Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK_BACST2.547e-2742.04Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05002B09SK FlavRip1 Citrus clementina cDNA clone C05002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293891 ID=CX293891; Name=CX293891; organism=Citrus clementina; type=EST; length=513bp
ATGGTCAGTGCACACCTGGAAAGGGAGTTGTAGGTCCAAATGCTAGAAGA
AAAACGAAGATAGTGTGTACAATTGGTCCTTCCACAAGCTCACGGGAAAT
GATATGGAAACTGGCAGAAGAGGGAATGAATGTGGCACGTTTAAATATGT
CGCATGGAGACCATGCATCACACCAGAAAACTATTGATCTCGTCAAAGAA
TACAATTCTCAATTTGAAGACAAGGCTGTAGCCATAATGCTGGACACCAA
GGGTCCTGAGGTTAGGAGTGGAGATGTACCTCAACCAATCATCCTGAAGG
AGGGTCAGGAATTTAATTTTACTATCAAAAGAGGGGTTAGCACAGAAGAT
ACTGTTAGTGTGAACTATGATGACTTTGTGAATGACGTAGAGGTTGGAGA
CATACTACTGGTAGATGGTGGAATGATGTCATTAGCTGTGAAGTCAAAGA
CAAAGGATCTGGTTAAATGCATAGTAGTTGATGGCGGTGAGCTAAAATCA
AGACGTCATTTAA
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