CX293896

Overview
NameCX293896
Unique NameCX293896
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig445 contig Ccv1_Contig445:80..605. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 9.668e-73
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 9.668e-73
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 9.668e-73
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 9.668e-73
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 2.154e-72
Identity = 134/149 (89.93%), Postives = 143/149 (95.97%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE D+DGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM2_PETHY (Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 2.154e-72
Identity = 130/149 (87.25%), Postives = 145/149 (97.32%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MA+QLT++QI+EFKEAF+LFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI+E DAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFD DQNG+IS A++RHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:    1 MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEFVRMMLAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 2.813e-72
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFD D NGFIS AELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 270.396 bits (690), Expect = 3.674e-72
Identity = 131/149 (87.92%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 270.396 bits (690), Expect = 3.674e-72
Identity = 131/149 (87.92%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149          
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 4.798e-72
Identity = 131/149 (87.92%), Postives = 142/149 (95.30%), Query Frame = 2
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFD D NGFIS AELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
The following BLAST results are available for this feature:
BLAST of CX293896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 476
Match NameE-valueIdentityDescription
CALM_PROMN9.668e-7390.60Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI9.668e-7390.60Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI9.668e-7390.60Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU9.668e-7390.60Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_HETTR2.154e-7289.93Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALM2_PETHY2.154e-7287.25Calmodulin-2 OS=Petunia hybrida GN=CAM72 PE=2 SV=2[more]
CALM_MACPY2.813e-7288.59Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE3.674e-7287.92Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU3.674e-7287.92Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_PYTSP4.798e-7287.92Calmodulin OS=Pythium splendens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05002C04SK FlavRip1 Citrus clementina cDNA clone C05002C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293896 ID=CX293896; Name=CX293896; organism=Citrus clementina; type=EST; length=526bp
AAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCACCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGA
GCTCCAGGACATGATCAATGAAGCGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACACGGATCAGAA
TGGTTTCATCTCAACTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCTCTTT
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