CX293896

Overview
NameCX293896
Unique NameCX293896
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig445 contig Ccv1_Contig445:80..605. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 266.159 bits (679), Expect = 6.928e-71
Identity = 129/149 (86.58%), Postives = 140/149 (93.96%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 1.182e-70
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MAD LT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD D NG IS AELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:    1 MADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 264.618 bits (675), Expect = 2.016e-70
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQL+++QISEFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTE ELQDMINE DADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFD D NG+IS AELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 2.633e-70
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFD D +GFIS AELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 264.233 bits (674), Expect = 2.633e-70
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFD D NG+IS AELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 3.438e-70
Identity = 127/149 (85.23%), Postives = 142/149 (95.30%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQL+++QISEFKEAF+LFDKDGDG ITTKELGTVMRSLGQNP++AEL+DMINE DADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFD D NG+IS AELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVK+M++K
Sbjct:    1 MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 263.462 bits (672), Expect = 4.491e-70
Identity = 128/149 (85.91%), Postives = 139/149 (93.29%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE D DGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 262.307 bits (669), Expect = 1.000e-69
Identity = 127/149 (85.23%), Postives = 140/149 (93.96%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEAF+LFDKDG+G ITTKELGTVMRSLGQNPTE ELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE++EAF+VFD D NGFIS AELRHVMTN GEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 1.307e-69
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MA+ LT +QI+EFKEAF+LFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINE D DG+GTIDFPEFL LM+RKM DTD+EEE+KEAFRVFD D NGFIS AELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    1 MAEALTHEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX293896 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 261.536 bits (667), Expect = 1.706e-69
Identity = 128/149 (85.91%), Postives = 140/149 (93.96%), Query Frame = 2 
Query:    8 MADQLTDDQISEFKEAFTLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEADADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDTDQNGFISTAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 454
            MADQLT++QI+EFKEA +LFDKDGDG ITTKELGTVMRS+GQNPTEAELQDMINE DADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+ FD D NGFIS AELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:    1 MADQLTEEQIAEFKEAGSLFDKDGDGTITTKELGTVMRSVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of CX293896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 476
Match NameE-valueIdentityDescription
CALMB_HALRO6.928e-7186.58Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM_STYLE1.182e-7087.92Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PAXIN2.016e-7085.91Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_PATSP2.633e-7085.91Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_OREMO2.633e-7085.91Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CALM_AGABI3.438e-7085.23Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_SUBDO4.491e-7085.91Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM2_BRAFL1.000e-6985.23Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]
CALM_EUGGR1.307e-6986.58Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_ACHKL1.706e-6985.91Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC05002C04SK FlavRip1 Citrus clementina cDNA clone C05002C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293896 ID=CX293896; Name=CX293896; organism=Citrus clementina; type=EST; length=526bp
AAGAAAAATGGCGGATCAGCTCACGGACGATCAGATCTCTGAGTTCAAAG
AGGCCTTCACCTTGTTTGACAAGGATGGCGACGGTTGCATTACCACCAAG
GAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGCTGA
GCTCCAGGACATGATCAATGAAGCGGATGCTGATGGTAATGGAACTATTG
ATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACCGAC
TCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACACGGATCAGAA
TGGTTTCATCTCAACTGCTGAGCTGCGCCATGTGATGACAAACCTAGGAG
AGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGATGTT
GATGGTGATGGCCAGATAAATTATGAGGAATTTGTCAAGGTTATGATGGC
CAAGTAATGACCCCAACCCACCAATACTTATAAAATGGGTTGACTAAATT
ATAAAGGGATTCCTAGTTTTCTCTTT
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