CX294779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 59/193 (30.57%), Postives = 88/193 (45.60%), Query Frame = 2 Query: 56 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY---KAIDGSCDTYR-------------------KNAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 511 LS Q L+ CDT + +GC GG +D A+ F + G+ ++ YP+ + D + T R N++V + D Y+ P+ +DEK + K + N PV +E F LY+ GI++ GR HG +V G+G E D YW NSWG WGE G+ R+ R + Sbjct: 253 LSPQNLLSCDTHHQKGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGI 443
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11 Identity = 55/180 (30.56%), Postives = 82/180 (45.56%), Query Frame = 2 Query: 56 LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 538 LS Q ++DC + + C GG + +YA + GI E Y+A D CD + + TI +Y + D EK + + AN P+S I Y GI+T ++ +H ++ G+G N G +YWIV+NSWG WGE G++R+ V T G G Sbjct: 120 LSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSN-YTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI---VTSTYKGGTG 288 The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bpback to top |