CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:587..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.154e-38
Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+ ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA E     F+LY+SG++T   CGT+   ++H V AVGYG E+G  YW++KNSWG+ WG+ GY +ME          CG+A  ASY
Sbjct:  172 TTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSV-NITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMG-----KNMCGVATCASY 356          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.266e-38
Identity = 88/193 (45.60%), Postives = 119/193 (61.66%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDE-------KALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T++DYPY+A +G C   +   KV TID YE + ++DE       +A   A+  QP+SV+I+     F LY  GI+ G   TS   ++H V  VGYG+ +G DYWI KNSWG  WGE GYI ++RN  G L G CG+   ASY
Sbjct:  167 AIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDKV-TIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAKD--FHLYTGGIYDGENCTSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRN-TGNLLGVCGMNYFASY 354          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.396e-37
Identity = 89/186 (47.85%), Postives = 116/186 (62.37%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            IA VE I KI  G L  LSEQ+++DC   Y  GC GG    AFEFII N G+ +   YPYKA  G+C T    N+  +T   Y  VP N+E ++  AV+ QP++VA++     FQ Y+SG+F G CGTSL+H VTA+GY    G D  I    WG+ WGEAGYIRM R+V+ + +G CGIA++  Y
Sbjct:   32 IATVESIYKIKKGILEPLSEQQVLDCAKGY--GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYIT--GYARVPRNNESSMMYAVSKQPITVAVDANAN-FQYYKSGVFNGPCGTSLNHAVTAIGY----GQDSIIYPKKWGAKWGEAGYIRMARDVSSS-SGICGIAIDPLY 207          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.823e-37
Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   PVSV+I+    +FQ Y  G++    C   +++H V  VGYGT+ G  YWI+KNSWG SWG  GY+ + RN        CGI   AS+
Sbjct:  147 ALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARN----KNNACGITNLASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.110e-37
Identity = 85/189 (44.97%), Postives = 114/189 (60.32%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D SC  Y    K      Y ++P  +EKAL++AVA   P+SVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  145 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.062e-37
Identity = 85/189 (44.97%), Postives = 114/189 (60.32%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  145 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 85/189 (44.97%), Postives = 112/189 (59.26%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  144 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 85/189 (44.97%), Postives = 112/189 (59.26%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  144 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 85/189 (44.97%), Postives = 112/189 (59.26%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   + SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  144 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 84/189 (44.44%), Postives = 114/189 (60.32%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C  Y    K      Y ++P  +EKAL++AVA   P+SVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  144 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CYSP2_MAIZE2.154e-3846.35Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
P34_SOYBN6.266e-3845.60P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
BROM2_ANACO1.396e-3747.85Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CATK_RAT1.823e-3745.70Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_CANFA3.110e-3744.97Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_PIG4.062e-3744.97Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_MACMU6.928e-3744.97Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA6.928e-3744.97Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN6.928e-3744.97Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_BOVIN6.928e-3744.44Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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