CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:587..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.048e-37
Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  N GID+E+ YPY   D SC  Y    K      Y ++P  +EKAL++AVA   PVSVAI+    +FQ Y  G++    C + +++H V AVGYG + G  +WI+KNSWG SWG  GYI M RN        CGIA  AS+
Sbjct:  144 SVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESC-MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 9.048e-37
Identity = 83/186 (44.62%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+++  NGGID+E+ YPY   D SC  Y   AK      Y ++P+ +EKAL++AVA   P+SV+I+    +FQ Y  G++    C   +++H V  VGYGT+ G+ +WI+KNSWG SWG  GY  + RN        CGI   AS+
Sbjct:  147 ALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC-MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARN----KNNACGITNMASF 326          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.543e-36
Identity = 85/189 (44.97%), Postives = 114/189 (60.32%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            ++ A+EG  K  TG L+SLS Q LV C  S N GC GG M  AFE++  N GID+E+ YPY   D SC  Y    K      Y ++P ++EKAL++AVA   PVSV I+    +FQ Y  G++  TG    +++H V AVGYG + G  +WI+KNSWG+ WG  GY+ + RN+  T    CGIA  AS+
Sbjct:  149 SVGALEGQLKRRTGKLLSLSPQNLVYC-VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESC-MYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQT----CGIANLASF 331          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.485e-35
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFT-GRCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY   D +C    +N  V  ++   ++ L  E  L+ AV   +PVS+A E    +F+LY+SG++T   CG++   ++H V AVGYG E+G  YW++KNSWG+ WG+ GY +ME          CGIA  ASY
Sbjct:  170 TTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSV-NITLGAEDELKHAVGLVRPVSIAFEVIH-SFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMG-----KNMCGIATCASY 354          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.106e-34
Identity = 80/185 (43.24%), Postives = 103/185 (55.68%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            +  +EGI KI TG+L   SEQEL+DCD   + GCNGG    A + +   G I     YPY+ +   C +  K       D    V   +E AL  ++ANQPVSV +E  G  FQLY  GIF G CG  +DH V AVGY    G +Y ++KNSWG+ WGE GYIR++R   G   G CG+   + Y
Sbjct:  164 VVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGGYPWSALQLVAQYG-IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGY----GPNYILIKNSWGTGWGENGYIRIKRG-TGNSYGVCGLYTSSFY 341          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.106e-34
Identity = 88/192 (45.83%), Postives = 112/192 (58.33%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY   +G C   + N  V  I    ++ L  E  L+ AVA  +PVSVA E     F+ Y+SG++    CG +   ++H V AVGYG ENG  YW++KNSWG+ WGE GY +ME          CG+A  ASY
Sbjct:  168 TTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSV-NITLGAEYELKYAVALVRPVSVAFEVV-KGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMG-----KNMCGVATCASY 352          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 82/190 (43.16%), Postives = 113/190 (59.47%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T AA+E  + I +GS + LS Q+LVDC TSY N GCNGG     FE++ DNG ++++ DYPY   +  C    K+  VV +  Y+ V  + E +L++AV    P+S  + G  M  + Y  GIF  +   G +L HGV  VGYG ENG  YWI+KN+WG+ WGE+GYIR+ R+        CG+   ASY
Sbjct:  139 TAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDNG-LESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTAS-ETSLKEAVGTIGPISAVVFGKPM--KSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDT----DHSCGVEKMASY 320          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.464e-34
Identity = 90/226 (39.82%), Postives = 114/226 (50.44%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGAD-------------------------------------YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  + EG + + T  L+SLSEQ LVDC     N GC+GGLM+ AF++II N GIDTE  YPY A  GS   + K+    TI  Y ++    E +L+    + PVSVAI+    +FQLY SGI +  +C  T LDHGV  VGYG +   D                                     YWIVKNSWG+SWG  GYI M ++        CGIA  +SY
Sbjct:  152 TTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKD----RKNNCGIASVSSY 373          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.364e-34
Identity = 85/192 (44.27%), Postives = 113/192 (58.85%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  A+E    I +G ++SL+EQ+LVDC  ++N  GC GGL   AFE+I+ N GI  E+ YPY   D SC  +     V  + +  ++ LNDE A+ +AVA   PVS A E     F +Y+SG+++ + C  + D   H V AVGYG +NG  YWIVKNSWGS WGE GY  +ER         CG+A  ASY
Sbjct:  144 TTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC-RFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTE-DFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERG-----KNMCGLAACASY 328          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.223e-33
Identity = 85/192 (44.27%), Postives = 110/192 (57.29%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTGR-CGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            T  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE+I  NGG+DTEE YPY   DG C    KN  V  + D  ++ L  E  L+ AV   +PVSVA E     F+ Y+ G+FT   CG +   ++H V AVGYG E+   YW++KNSWG  WG+ GY +ME          CG+A  +SY
Sbjct:  170 TTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGV-QVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVH-EFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG-----KNMCGVATCSSY 354          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATK_RABIT9.048e-3745.50Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MOUSE9.048e-3744.62Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_CHICK1.543e-3644.97Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ALEU_ARATH6.485e-3544.27Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
PAPA1_CARPA1.106e-3443.24Papain OS=Carica papaya PE=1 SV=1[more]
CYSP3_SOLLC1.106e-3445.83Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATLL_PHACE1.887e-3443.16Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP2_DICDI2.464e-3439.82Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATH_MOUSE9.364e-3444.27Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
ALEUL_ARATH1.223e-3344.27Thiol protease aleurain-like OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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