CX294781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.290e-17 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 585 KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q + L + L+ + N +IS+ A+ L ANIL+S R V T++ G DE G +Y +D GG + Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMI 130
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB8_PIG (Proteasome subunit beta type-8 (Fragment) OS=Sus scrofa GN=PSMB8 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 412 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGH-GSLWIRFTYAY 627 RL+ L N RISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G+ S TYAY Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNTYAY 73
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16 Identity = 40/127 (31.50%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 208 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK 588 K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D+ GG ++ Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIE 131
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 579 KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLANI+ + ++ G+DE P LY VD GG Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKLYSVDMVGG 128
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGG 579 KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D GG Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGG 126
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 579 KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLAN+L R + ++ G+DE P LY VD GG Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYSVDMMGG 128
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 217 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 579 KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R L + L++ + +SV + LLANIL + ++ G+DE P L+ VD GG Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK-PRLFSVDMVGG 128
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK------GHGSL 603 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K G GSL Sbjct: 28 DFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSL 175
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK------GHGSL 603 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K G GSL Sbjct: 28 DFAKKGYKLPTARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSL 175
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 211 HAK--GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 576 HA+ GTT +F++GV++ AD+RA+ ++ +S +KI I P + AG AAD + R + K LH L+ R V +++L L+ Y+G + ++ G D TGP LY V G Sbjct: 34 HARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLTGPQLYGVHPHG 156 The following BLAST results are available for this feature:
BLAST of CX294781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294781 ID=CX294781; Name=CX294781; organism=Citrus clementina; type=EST; length=629bpback to top |