CX294781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK------GHGSL 603 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K G GSL Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSL 175
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 175 DEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK------GHGSL 603 D +K K GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L R V A+++L +L+ Y+G + ++ G D TGP LY + G K G GSL Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSL 175
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK------GHGSLWI 609 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V G L G GS +I Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYI 152
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.856e-11 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLK------GHGSLWI 609 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V G L G GS +I Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYI 152
BLAST of CX294781 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.954e-11 Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 1 Query: 220 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK------GHGSL 603 GTT ++K+G+++ AD+RA+ G ++ ++ KI I+P + AG AAD + + LH L+ R V A+++L +L+ Y+G + ++ G D TGP LY + G K G GSL Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSL 175 The following BLAST results are available for this feature:
BLAST of CX294781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294781 ID=CX294781; Name=CX294781; organism=Citrus clementina; type=EST; length=629bpback to top |