CX294813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.520e-27 Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = 3 Query: 24 KTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 + GG N S + L EA +V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI S+ PI G L++ + +Y+ + + S+P + Y +LPA C++T +P++ ++ + +F+ + +LE G+ I WW N Sbjct: 739 QNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRN 927
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.024e-26 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S++ + L EA V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI FS P+ G L+ + +Y+ + + SIP L Y LPA C++T P++ L ++LF+ +LE +G+ I WW N Sbjct: 755 SASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRN 936
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.338e-26 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S++ + L EA V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI FS P+ G L+ + +Y+ + + SIP L Y LPA C++T P++ L ++LF+ +LE +G+ I WW N Sbjct: 754 SASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRN 935
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.338e-26 Identity = 66/182 (36.26%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 39 SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 S++ + L EA V CGYE + WG E+G +YG+ ED LTG +H GWRS YC+P AF G A + + Q RWA G +EI FS P+ G L+ + +Y+ + + SIP L Y LPA C++T P++ L ++LF+ +LE +G+ I WW N Sbjct: 754 SASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRN 935
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.295e-25 Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWW 578 NI ++A +A C YE + WG+E+G YG ED +TGL IH +GW S Y P AF+G A + + Q KRW+ G I SK N L GK+ + + Y W S+P + Y+ +PA ++ + P++ P + +F + LY+L E + +G +++ WW Sbjct: 410 NIDEIEEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFG-HGKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWW 586
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.621e-25 Identity = 63/173 (36.42%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVN 584 EA V C YE + WGD +G +YG+ ED +TG +H++GWRS YC+ AF G A + + Q RWATG +EI FSK N + AT +L+F Q +AYL + + SI + Y LPA C+ + + + + L + + L +LLE +G+ + WW N Sbjct: 712 EAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAMFAT--RRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRN 882
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.136e-24 Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 3 Query: 45 NISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWW 578 NI+ ++A + C YE+ + WG+++G YG AED +TGL IH +GW S + P AFLG A + + Q KRW+ G L I SK L GK++ + + Y W S+P L Y+ +P+ ++ + P++ P + +F + LY L E + +G +++ WW Sbjct: 415 NINEIEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFG-HGKIKLQLQMGYCICGLWAANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWW 591
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.789e-24 Identity = 61/170 (35.88%), Postives = 85/170 (50.00%), Query Frame = 3 Query: 69 AHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWW 578 AH VA C YE ++WG ++G YG+ ED TG ++H +GWRS +C P AF G + + QQ RW+ GLLE+ FS+ NP L I L L Y W IP + Y LP +I + PK +P + + LFL L +++ G + R WW Sbjct: 409 AHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNP-LTYGIKPLSLLMSLGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWW 577
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24 Identity = 66/174 (37.93%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLI-YKLYTLLEYIQAGLSIRSWWVN 584 E+ V C YE + WG VG +YG+ ED +TG +H++GWRS YC+ AF G A + + Q RWATG +EI FSK N +LA+ +L+F Q +AYL + + S+ + Y LPA + + F+ +PT L L L I L LLE +G+ + WW N Sbjct: 688 ESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLAS--RRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQ-FIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRN 858
BLAST of CX294813 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24 Identity = 66/174 (37.93%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 66 EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLI-YKLYTLLEYIQAGLSIRSWWVN 584 E+ V C YE + WG VG +YG+ ED +TG +H++GWRS YC+ AF G A + + Q RWATG +EI FSK N +LA+ +L+F Q +AYL + + S+ + Y LPA + + F+ +PT L L L I L LLE +G+ + WW N Sbjct: 688 ESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLAS--RRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQ-FIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRN 858 The following BLAST results are available for this feature:
BLAST of CX294813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294813 ID=CX294813; Name=CX294813; organism=Citrus clementina; type=EST; length=590bpback to top |