CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_BUCAP (Spermidine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=speE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.685e-11 Identity = 33/106 (31.13%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 219 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N +W + H + +IL++ K++Y ++++F++ G+++ +DG+VQ TEKDE Y EM+ H+P+ K REI RH S+E I + E Sbjct: 3 NEKIWHEKLHRHVGQYFSIDKILYQKKNKYHDIIIFQNSIMGRIMAIDGVVQTTEKDEFIYHEMLTHVPIFYHGLIKNVLIVGGGDGGILREICRHKSIENITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_PYRKO (Probable spermidine synthase OS=Pyrococcus kodakaraensis GN=speE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 237 GEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVE 503 G KVK LF+ ++EYQ + ++E+ +GK+LVLDG VQL E E +Y E++ H + + P+P+ RE+ RHD+VE Sbjct: 17 GYGVGFKVKRRLFETQTEYQRLEIYETEGFGKLLVLDGTVQLVEVGEESYHEVLVHPVMLAHPNPRKVLVIGGGDGGTLREVLRHDTVE 105
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_HAMD5 (Spermidine synthase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=speE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 32/103 (31.07%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 228 MWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W + HS +KE+L++ K+++Q++++F++ +G+V+ L+ +VQ TE+DE Y EM+ H+PL + K RE+ RH V+ I + E Sbjct: 6 LWYEKLHSSFGQYFSIKEVLYRDKTDHQDLIIFDTEEFGRVMALNHVVQTTERDEFIYHEMMTHVPLLAHGDAKKVLIIGGGDGGILREVCRHAGVKEIIMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_EUBE2 (Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=speE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 36/103 (34.95%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 231 WPGEAHS------LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 W E HS ++V++ LF G+S+YQ + VF+S +GK L L+G V +E+D Y EM+ H+P+ P K +E+ ++D++E IDI E Sbjct: 4 WFSELHSPHVKFDIRVEKQLFSGESDYQRIDVFQSPEFGKFLTLNGSVIFSEQDCFIYNEMVVHVPMSVHPDVKNVLIIGGGDGGVSKELLQYDNIENIDIVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOBA (Spermidine synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=speE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11 Identity = 33/104 (31.73%), Postives = 58/104 (55.77%), Query Frame = 3 Query: 228 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W E H S++V L+ +S++Q + + ES +G+ LDG++ +TEKDE Y +MI H+P+ + P+ K RE++R+ ++E ID+ E Sbjct: 3 LWYTEKHTEDVKFSIRVDRELYTEQSKFQRIDILESKEFGRFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKKVLVIGAGDGGTIRELTRYKTIEKIDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_SILST (Spermidine synthase OS=Silicibacter sp. (strain TM1040) GN=speE PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 3 Query: 243 AHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 A SL+V E+ + K+E+Q + VF++ +G+VL LD +VQ TE D Y EM+ H+P+ + + K RE+ +H SVE + + E Sbjct: 16 AQSLRVSEMYYDSKTEHQRLKVFQNGTFGRVLTLDDVVQTTEGDNFIYHEMLTHVPILAHGAAKRVLIIGGGDGGIAREVLKHASVEHVTMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE1_PSEAE (Spermidine synthase 1 OS=Pseudomonas aeruginosa GN=speE1 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11 Identity = 29/102 (28.43%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 216 FNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 + ++ G + +L + ++E+Q +++FE+ G+V+ LDG++Q TE DE Y EM+ H+P+ + + + RE+++H SVE I + E Sbjct: 4 YQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFENARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVE 105 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |