CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_MOOTA (Spermidine synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=speE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.521e-14 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 210 MYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 ++F+ P A S+++ + L K+ YQE+ V ++ AYG++L+LD I+Q T KDE Y EMIAH+PL + P+P+T REI +H S+E + + E Sbjct: 4 IWFSELQTPDLAISVRLNQTLHHEKTPYQELAVVDTEAYGRMLLLDNIIQTTVKDEFFYHEMIAHVPLNTHPNPRTALVIGGGDGGVVREIVKHPSIEKVTLVE 107
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP7 (Spermidine synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=speE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.987e-14 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 219 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +NP+W H V +L+ K+++Q++++F++ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + + K RE+SRH S+E I + E Sbjct: 3 DNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_KLEP3 (Spermidine synthase OS=Klebsiella pneumoniae (strain 342) GN=speE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.987e-14 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 219 NNPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +NP+W H V +L+ K+++Q++++F++ A+G+V+ LDG+VQ TE+DE Y EM+ H+PL + + K RE+SRH S+E I + E Sbjct: 3 DNPLWHETLHDHFGQYFSVDNVLYHEKTDHQDLIIFDNRAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGNAKHVLIIGGGDGAMLREVSRHRSIETITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ALKOO (Spermidine synthase OS=Alkaliphilus oremlandii (strain OhILAs) GN=speE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.595e-14 Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 228 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W E H S+KV L+ G+SE+Q + VFES +GK LDG++ +TEKDE Y +MI H+P+ + P K RE++R++++E ID+ E Sbjct: 3 LWYTEQHTEDVRFSIKVDNQLYSGQSEFQRIDVFESKEFGKFFTLDGLMMVTEKDEFIYHDMITHIPMATNPKIKNVLVIGAGDGGTVRELTRYETIENIDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_THEPX (Spermidine synthase OS=Thermoanaerobacter sp. (strain X514) GN=speE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.389e-14 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 249 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 SLKVKE L K+ YQ + + ++ +G+VL LDGI+Q TEKDE Y EMI H+PL + +PK+ RE+ +H SVE + + E Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_THEP3 (Spermidine synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=speE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.389e-14 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 249 SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 SLKVKE L K+ YQ + + ++ +G+VL LDGI+Q TEKDE Y EMI H+PL + +PK+ RE+ +H SVE + + E Sbjct: 16 SLKVKETLVVEKTPYQHLAILDTYQFGRVLTLDGILQTTEKDEFVYHEMIVHVPLFTHKNPKSVLIVGGGDGGSVREVLKHPSVERVVLAE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_ERWT9 (Spermidine synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=speE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.426e-14 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 222 NPMWPGEAHS-----LKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 N MW H+ V +I+++ K+++Q++++FE+ A G+V+ LDG+VQ TE+DE Y EM+ H+PL + +PK RE+ RH ++E I + E Sbjct: 4 NEMWYETLHTGFGQYFSVDKIIYREKTDHQDLVIFENAALGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGAPKRVLIIGGGDGAMLREVCRHKNIEQITMVE 108
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOPS (Spermidine synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=speE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 228 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W E H S+KV E L+ GKS++Q + VF+S +G LDG++ +TEKDE Y +MI H+P+ + P+ K RE++R++++E ID+ E Sbjct: 3 LWYTEEHTDKVRFSIKVDEQLYSGKSDFQRIDVFKSQEFGTFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTVRELTRYETIEKIDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOPE (Spermidine synthase OS=Clostridium perfringens GN=speE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 228 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W E H S+KV E L+ GKS++Q + VF+S +G LDG++ +TEKDE Y +MI H+P+ + P+ K RE++R++++E ID+ E Sbjct: 3 LWYTEEHTDKVRFSIKVDEQLYSGKSDFQRIDVFKSQEFGTFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTVRELTRYETIEKIDMVE 106
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPEE_CLOP1 (Spermidine synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=speE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 228 MWPGEAH------SLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +W E H S+KV E L+ GKS++Q + VF+S +G LDG++ +TEKDE Y +MI H+P+ + P+ K RE++R++++E ID+ E Sbjct: 3 LWYTEEHTDKVRFSIKVDEQLYSGKSDFQRIDVFKSQEFGTFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTVRELTRYETIEKIDMVE 106 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |