CX294966

Overview
NameCX294966
Unique NameCX294966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length642
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3541 contig Ccv1_Contig3541:53..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 3
Query:  360 RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            R  +L GKYELG++LGHGTFAKVYLA+N+++G  +A                 IKREIS+++ V+H +IV L EVMA+KSKIYF M+ V GGEL
Sbjct:   66 RNNILMGKYELGKLLGHGTFAKVYLAQNIKSGDKVAIKVIDKEKIMKSGLVAHIKREISILRRVRHPYIVHLFEVMATKSKIYFVMEYVGGGEL 159          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.826e-21
Identity = 48/91 (52.75%), Postives = 67/91 (73.63%), Query Frame = 3
Query:  369 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            L+ G+YE+G++LGHGTFAKVYLARN++T +S+A                 IKREIS+++ V+H +IV+L EVMA+K+KIYF M+ V+GGEL
Sbjct:   21 LILGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGEL 111          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKF_ORYSJ (CBL-interacting protein kinase 15 OS=Oryza sativa subsp. japonica GN=CIPK15 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21
Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 3
Query:  354 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            + R  +L  +YELGR+LG GTF KV+ ARNL++ +S+A               EQI+REI+ M++V HK+IV+LHEVMA+++KIYF M+ VKGGEL
Sbjct:    2 ESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQILKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGEL 97          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKE_ORYSJ (CBL-interacting protein kinase 14 OS=Oryza sativa subsp. japonica GN=CIPK14 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21
Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 3
Query:  354 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            + R  +L  +YELGR+LG GTF KV+ ARNL++ +S+A               EQI+REI+ M++V HK+IV+LHEVMA+++KIYF M+ VKGGEL
Sbjct:    2 ESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQVLKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGEL 97          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = 3
Query:  354 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            +++P++L  KY++GR+LG GTFAKVY  R++ T +S+A               EQIKREISVM++ +H ++VEL+EVMA+K++IYF M+  KGGEL
Sbjct:    2 ENKPSVLTDKYDVGRLLGQGTFAKVYYGRSILTNQSVAIKMIDKEKVMKVGLIEQIKREISVMRIARHPNVVELYEVMATKTRIYFVMEYCKGGEL 97          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.298e-20
Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 3
Query:  345 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            G G  R T   G+YELG+ +G G+FAKV +AR+ +TG ++A               EQIKREIS MK++KH ++V+LHEVMASKSKIY  ++ V GGEL
Sbjct:   14 GAGPARRTTRVGRYELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGEL 112          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKJ_ORYSJ (CBL-interacting protein kinase 19 OS=Oryza sativa subsp. japonica GN=CIPK19 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  345 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GGG     LL G+YELGR+LGHGTFAKVY AR+  +G+ +A                 IKREI++++ V+H +IV L EVMA+KSKIYF M+LV+GGEL
Sbjct:   29 GGG-----LLLGRYELGRLLGHGTFAKVYQARSADSGEPVAIKVLDKEKAMRHGLVPHIKREIAILRRVRHPNIVRLFEVMATKSKIYFVMELVRGGEL 122          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 3
Query:  369 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            +L  +YE+G++LG GTFAKVY  RN+ T +S+A               +QIKREISVMK+V+H +IV+L+EVMA+KSKIYF ++ VKGGEL
Sbjct:   10 ILLRRYEIGKLLGQGTFAKVYHGRNIVTSQSVAIKVIDKDKIFKVGLMDQIKREISVMKLVRHPNIVQLYEVMATKSKIYFVLEYVKGGEL 100          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.777e-20
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 3
Query:  369 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            +L  KYE+GR+LG GTF KVY  + + TG+S+A               EQIKREIS+M++V+H +IVEL EVMA+K+KI+F M+ VKGGEL
Sbjct:   38 VLFAKYEMGRLLGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTKIFFIMEYVKGGEL 128          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK2_ARATH (CBL-interacting serine/threonine-protein kinase 2 OS=Arabidopsis thaliana GN=CIPK2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.777e-20
Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 3
Query:  354 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            +++P++L  +YE+GR+LG GTFAKVY  R+  T +S+A               +QIKREISVM++ KH ++VEL+EVMA+KS+IYF ++  KGGEL
Sbjct:    2 ENKPSVLTERYEVGRLLGQGTFAKVYFGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVELYEVMATKSRIYFVIEYCKGGEL 97          
The following BLAST results are available for this feature:
BLAST of CX294966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CIPKI_ARATH5.826e-2153.19CBL-interacting serine/threonine-protein kinase 18... [more]
CIPKC_ARATH5.826e-2152.75CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKF_ORYSJ7.609e-2151.04CBL-interacting protein kinase 15 OS=Oryza sativa ... [more]
CIPKE_ORYSJ7.609e-2151.04CBL-interacting protein kinase 14 OS=Oryza sativa ... [more]
CIPKA_ARATH1.298e-2048.96CBL-interacting serine/threonine-protein kinase 10... [more]
CIPK9_ORYSJ1.298e-2050.51CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPKJ_ORYSJ2.214e-2052.53CBL-interacting protein kinase 19 OS=Oryza sativa ... [more]
CIPKI_ORYSJ2.214e-2053.85CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPKP_ARATH3.777e-2052.75CBL-interacting serine/threonine-protein kinase 25... [more]
CIPK2_ARATH3.777e-2048.96CBL-interacting serine/threonine-protein kinase 2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065B05SK DroRLeaf1 Citrus clementina cDNA clone C05065B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294966 ID=CX294966; Name=CX294966; organism=Citrus clementina; type=EST; length=642bp
CTCCCGGTAAACCCATCGATAAGCCTTTGATCAATAGCAGCAAATCAAAA
TCCTTCTCGTCTCCCCCCAAGAAAAAATAAATAAGCAAACACTACAAGCC
CCTTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTGGAGATTGCCTGAG
CTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAATTGCCACCGGAA
ACACGTCGAAGACGGGTGATCCTCAACCACCACCACAACACAAAAGAAAA
CCTGAAAGAATTATTTAATTAGCTAAACTTGGTACATATATACGTATAAA
AGGAAAAAAAAGACCGCGTGGAGATGGCTACATCAAACAGTAACGGCGGA
GGCGATGACAGGCCGACGTTGCTACATGGGAAATACGAGCTGGGGCGTAT
GCTAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAGAAATTTGCAGA
CGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACAAGGTTATCAAG
GTGGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTCATGAAGATGGT
GAAGCACAAGCACATAGTTGAGCTACACGAAGTCATGGCAAGTAAGTCCA
AGATTTACTTCGCCATGGACCTCGTCAAAGGCGGCGAGCTGT
back to top