CX294966

Overview
NameCX294966
Unique NameCX294966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length642
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3541 contig Ccv1_Contig3541:53..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.099e-19
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 3
Query:  333 SNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            S S+ GG  R     GKYELGR LG GTFAKV  ARN++ G ++A                QIKREIS MK++KH +++ + EVMASK+KIYF ++ V GGEL
Sbjct:   18 SGSSSGGRTRV----GKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIKHPNVIRMFEVMASKTKIYFVLEFVTGGEL 116          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKC_ORYSJ (CBL-interacting protein kinase 12 OS=Oryza sativa subsp. japonica GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.099e-19
Identity = 51/99 (51.52%), Postives = 68/99 (68.69%), Query Frame = 3
Query:  345 GGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GGG    T+L GKYELGR+LG G+FAKVY AR+L+T + +A                 +KREI+V++ V+H +IV+L EVMASK+KIYF M+ V+GGEL
Sbjct:   34 GGGGSGGTVL-GKYELGRVLGQGSFAKVYQARHLETDECVAIKVLDKEKAVKGGMVHLVKREINVLRRVRHPNIVQLFEVMASKTKIYFVMEYVRGGEL 131          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKU_ORYSJ (CBL-interacting protein kinase 30 OS=Oryza sativa subsp. japonica GN=CIPK30 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  369 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            ++ G+Y+LGR+LG GTFAKVY A  L TG+++A               EQ+KRE+ VM+ V H+H++ LHEVMA++S+IYF M+   GGEL
Sbjct:   12 VIMGRYKLGRLLGRGTFAKVYKAYKLATGEAVAIKVFDKEAVQRSGTVEQVKREVDVMRRVHHRHVIRLHEVMATRSRIYFVMEYASGGEL 102          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKM_ARATH (CBL-interacting serine/threonine-protein kinase 22 OS=Arabidopsis thaliana GN=CIPK22 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 3
Query:  342 NGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            N  GDD  + L GKY+LG++LG G FAKVY A +LQ G                     +KREISVM+ ++H HIV L EV+A+K+KIYF M+L KGGEL
Sbjct:   14 NVTGDDNKSALFGKYDLGKLLGSGAFAKVYQAEDLQNGGESVAIKVVQKKRLKDGLTAHVKREISVMRRLRHPHIVLLSEVLATKTKIYFVMELAKGGEL 113          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKD_ORYSJ (Putative CBL-interacting protein kinase 13 OS=Oryza sativa subsp. japonica GN=CIPK13 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.435e-19
Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  336 NSNGGGDD--RPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            +  G G +  +P LL G++E+G++LG G FAKVY ARN+ TG+ +A                 IKREI+V++ V+H HIV+L+EVMA+K +IYF M+ V+GGEL
Sbjct:    7 SKGGSGKEAKKPPLLLGRFEVGKLLGQGNFAKVYHARNVATGEEVAIKVMEKEKIFKSGLTAHIKREIAVLRRVRHPHIVQLYEVMATKLRIYFVMEYVRGGEL 110          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            G+YELGR LG GTFAKV  ARN  +G+++A                QIKREIS MK+++H +++ +HEVMASK+KIY  M+LV GGEL
Sbjct:   11 GRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVMELVTGGEL 98          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 3
Query:  366 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            ++L  +Y +GR LG GTF KVY ARNL +G+S+A               EQIKREIS+M++V+H ++++L EVMA+KS IYFA++  KGGEL
Sbjct:    5 SVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSNIYFALEYAKGGEL 96          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKB_ARATH (CBL-interacting serine/threonine-protein kinase 11 OS=Arabidopsis thaliana GN=CIPK11 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19
Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 3
Query:  348 GGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            G  D    L GKYELG++LG G FAKV+ AR+ +TG+S+A                  IKREIS+M+ + H +IV+LHEVMA+KSKI+FAM+ VKGGEL
Sbjct:    9 GSGDNNDALFGKYELGKLLGCGAFAKVFHARDRRTGQSVAVKILNKKKLLTNPALANNIKREISIMRRLSHPNIVKLHEVMATKSKIFFAMEFVKGGEL 107          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  354 DDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            ++   +L GKYE+GR+LG GTFAKVY  + +  G+ +A                EQIKREIS+MK+V+H +IVEL EVMA+K+KI+F M+ VKGGEL
Sbjct:    2 EEERRVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMKRPGMMEQIKREISIMKLVRHPNIVELKEVMATKTKIFFVMEFVKGGEL 98          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKD_ARATH (CBL-interacting serine/threonine-protein kinase 13 OS=Arabidopsis thaliana GN=CIPK13 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 3
Query:  366 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            ++L  KYE+G++LGHG+FAKVYLARN+ +G+ +A                 IKREIS+++ V+H +IV L EVMA+K+KIY  M+ V+GGEL
Sbjct:   51 SILMDKYEIGKLLGHGSFAKVYLARNIHSGEDVAIKVIDKEKIVKSGLAGHIKREISILRRVRHPYIVHLLEVMATKTKIYIVMEYVRGGEL 142          
The following BLAST results are available for this feature:
BLAST of CX294966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CIPKN_ARATH1.099e-1949.51CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKC_ORYSJ1.099e-1951.52CBL-interacting protein kinase 12 OS=Oryza sativa ... [more]
CIPKU_ORYSJ1.435e-1948.35CBL-interacting protein kinase 30 OS=Oryza sativa ... [more]
CIPKM_ARATH1.435e-1949.00CBL-interacting serine/threonine-protein kinase 22... [more]
CIPKD_ORYSJ1.435e-1946.15Putative CBL-interacting protein kinase 13 OS=Oryz... [more]
CIPKN_ORYSJ2.448e-1952.27CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPKS_ORYSJ3.197e-1950.00CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
CIPKB_ARATH3.197e-1951.52CBL-interacting serine/threonine-protein kinase 11... [more]
CIPK5_ARATH5.453e-1950.52CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKD_ARATH7.122e-1948.91CBL-interacting serine/threonine-protein kinase 13... [more]

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Properties
Property NameValue
Genbank descriptionC05065B05SK DroRLeaf1 Citrus clementina cDNA clone C05065B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294966 ID=CX294966; Name=CX294966; organism=Citrus clementina; type=EST; length=642bp
CTCCCGGTAAACCCATCGATAAGCCTTTGATCAATAGCAGCAAATCAAAA
TCCTTCTCGTCTCCCCCCAAGAAAAAATAAATAAGCAAACACTACAAGCC
CCTTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTGGAGATTGCCTGAG
CTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAATTGCCACCGGAA
ACACGTCGAAGACGGGTGATCCTCAACCACCACCACAACACAAAAGAAAA
CCTGAAAGAATTATTTAATTAGCTAAACTTGGTACATATATACGTATAAA
AGGAAAAAAAAGACCGCGTGGAGATGGCTACATCAAACAGTAACGGCGGA
GGCGATGACAGGCCGACGTTGCTACATGGGAAATACGAGCTGGGGCGTAT
GCTAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAGAAATTTGCAGA
CGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACAAGGTTATCAAG
GTGGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTCATGAAGATGGT
GAAGCACAAGCACATAGTTGAGCTACACGAAGTCATGGCAAGTAAGTCCA
AGATTTACTTCGCCATGGACCTCGTCAAAGGCGGCGAGCTGT
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