CX294966

Overview
NameCX294966
Unique NameCX294966
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length642
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3541 contig Ccv1_Contig3541:53..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.754e-17
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GKYELGR +G GTFAKV  A+N++TG  +A               EQI+REI  MK+++H ++V LHEVM SK++I+  ++ V GGEL
Sbjct:   17 GKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGEL 104          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK4_ORYSJ (CBL-interacting protein kinase 4 OS=Oryza sativa subsp. japonica GN=CIPK4 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.908e-17
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3
Query:  327 ATSNSNGGGDDRPTLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXE-QIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            A    +GGG   P L  GKYELGRMLG GTFAKVYLAR +  G+++A                 ++ RE++ M+ ++H H++ LHEV+A++++IY  M+L  GG+L
Sbjct:    8 ARKKKSGGGGGEPLL--GKYELGRMLGRGTFAKVYLARAVAGGEAVAVKVIDKAEVMGTAGMAPRVLREVAAMRRLRHPHVLRLHEVLATRARIYLVMELATGGDL 111          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK1_ARATH (CBL-interacting serine/threonine-protein kinase 1 OS=Arabidopsis thaliana GN=CIPK1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.137e-16
Identity = 46/88 (52.27%), Postives = 54/88 (61.36%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GKYELGR LG G F KV  A++  +G S A                QIKREI  +KM+KH HIV LHEV+ASK+KI   M+LV GGEL
Sbjct:   18 GKYELGRTLGEGNFGKVKFAKDTVSGHSFAVKIIDKSRIADLNFSLQIKREIRTLKMLKHPHIVRLHEVLASKTKINMVMELVTGGEL 105          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.485e-16
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 3
Query:  369 LLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            L+ G+YELGR+LG GTFAKVY  R+L++G+S+A                EQ++REIS+M+MV+H ++V + EV+AS+++++  M+  +GGEL
Sbjct:   17 LVLGRYELGRLLGQGTFAKVYYGRDLRSGESVAIKVIDKARLRRTEGMVEQLRREISIMRMVRHPNVVGIREVLASRARVFVVMEYARGGEL 108          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.308e-16
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            G+YE+GR +G GTFAKV  A +  TG ++A                QIKREIS+MK+V+H +IV L+EV+A K+KIY  ++L+ GGEL
Sbjct:   16 GRYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGEL 103          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.321e-16
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 3
Query:  372 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            L G YE+GR LG G F KV  AR+L TG   A               +QI+REI+ +K+++H H+V LHEV ASK+KIY  ++ V GGEL
Sbjct:    9 LLGGYEMGRTLGEGNFGKVKYARHLATGGHFAVKILDRGRVVSLRAGDQIRREIATLKLLRHPHVVRLHEVAASKTKIYMVLEFVNGGEL 98          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPK1_ORYSJ (CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica GN=CIPK1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.643e-16
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 3
Query:  372 LHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            L G+YE+GR LG G F KV  AR+L TG   A               +QI+REI  +K++KH ++V LHEV ASK+KIY  ++ V GGEL
Sbjct:   15 LLGRYEIGRTLGEGNFGKVKYARHLATGAHFAIKILDRNKILSLRFDDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEYVNGGEL 104          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GKYE+G+ LG GTFAKV  A N +TG+ +A               EQI+REI  MK++ H ++V L+EV+ASK+KIY  ++   GGEL
Sbjct:   11 GKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICTMKLINHPNVVRLYEVLASKTKIYIVLEFGTGGEL 98          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15
Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  366 TLLHGKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXX-EQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            T+L  KY +GR+LG G FAKVY    + TG  +A                EQI+REI+VM++++H ++VEL EVMA+K KI+F M+ V GGEL
Sbjct:    9 TVLFDKYNIGRLLGTGNFAKVYHGTEISTGDDVAIKVIKKDHVFKRRGMMEQIEREIAVMRLLRHPNVVELREVMATKKKIFFVMEYVNGGEL 101          
BLAST of CX294966 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.642e-15
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  378 GKYELGRMLGHGTFAKVYLARNLQTGKSMAXXXXXXXXXXXXXXXEQIKREISVMKMVKHKHIVELHEVMASKSKIYFAMDLVKGGEL 641
            GKYELGR +G GTFAKV  A+N +  + +A               EQI+REI  MK+VKH ++V L EVM SK++I+  ++ V GGEL
Sbjct:   18 GKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKVQKHRLVEQIRREICTMKLVKHPNVVRLFEVMGSKARIFIVLEYVTGGEL 105          
The following BLAST results are available for this feature:
BLAST of CX294966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CIPK3_ORYSJ1.754e-1747.73CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]
CIPK4_ORYSJ3.908e-1742.45CBL-interacting protein kinase 4 OS=Oryza sativa s... [more]
CIPK1_ARATH1.137e-1652.27CBL-interacting serine/threonine-protein kinase 1 ... [more]
CIPKG_ORYSJ1.485e-1644.57CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]
CIPKO_ORYSJ3.308e-1647.73CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
CIPKH_ORYSJ4.321e-1646.67CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
CIPK1_ORYSJ5.643e-1646.67CBL-interacting protein kinase 1 OS=Oryza sativa s... [more]
CIPKQ_ARATH1.257e-1546.59CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKG_ARATH1.257e-1546.24CBL-interacting serine/threonine-protein kinase 16... [more]
CIPKV_ORYSJ1.642e-1546.59CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC05065B05SK DroRLeaf1 Citrus clementina cDNA clone C05065B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294966 ID=CX294966; Name=CX294966; organism=Citrus clementina; type=EST; length=642bp
CTCCCGGTAAACCCATCGATAAGCCTTTGATCAATAGCAGCAAATCAAAA
TCCTTCTCGTCTCCCCCCAAGAAAAAATAAATAAGCAAACACTACAAGCC
CCTTCAGGGAATGCAGAGAGATGAGAGGACCTTCGTGGAGATTGCCTGAG
CTGTGTTTACGTGCCCAGCGGTGCGTCGGCGGCCGTAATTGCCACCGGAA
ACACGTCGAAGACGGGTGATCCTCAACCACCACCACAACACAAAAGAAAA
CCTGAAAGAATTATTTAATTAGCTAAACTTGGTACATATATACGTATAAA
AGGAAAAAAAAGACCGCGTGGAGATGGCTACATCAAACAGTAACGGCGGA
GGCGATGACAGGCCGACGTTGCTACATGGGAAATACGAGCTGGGGCGTAT
GCTAGGCCACGGAACCTTCGCGAAGGTGTACCTGGCAAGAAATTTGCAGA
CGGGGAAAAGCATGGCCATGAAAGTTGTTGGTAAAGACAAGGTTATCAAG
GTGGGCATGATGGAGCAAATCAAGCGTGAAATCTCTGTCATGAAGATGGT
GAAGCACAAGCACATAGTTGAGCTACACGAAGTCATGGCAAGTAAGTCCA
AGATTTACTTCGCCATGGACCTCGTCAAAGGCGGCGAGCTGT
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