CX295016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_VIBCH (Dihydrolipoyl dehydrogenase OS=Vibrio cholerae GN=lpd PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 71/239 (29.71%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHE-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 GG C+ GC+P K L++ A E + +G E K D D +L ++K I +L G + V + G GK GPN +EV +G K + + ++A GSR + P IP ++ I S +AL L+E+P + +++GGG I +E A+++ +GS +D++ + + D +M V + ++ + NL T + + E+G+ ++ G+ A D VL A GR P Sbjct: 42 GGVCLNVGCIPSKALLHVAKVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKV--INQLTGGLAGMAKMRKVNVVNGYGKFTGPNTIEVDGEEG-KTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLIMGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDK-FNLMLETKVTAVEAKEDGI-YVSMEGKSAPAQAERYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 69/244 (28.28%), Postives = 119/244 (48.77%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTK-LSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRG--FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-----RITDHGEEIVADVVLFATGRAP 705 GGTC+ GC+P K L+ + ++ D + G +V + + ++++ K D + L + L V+ +G G + P + V +DG + AK+ +IATGS + P PG ++ ++S ALSL E+PK+ VLGGG I +E S+W +G+ V ++ + LP G D ++ ++R + +GI T + + + V+ + E DV+L A GR P Sbjct: 81 GGTCLNVGCIPSKALLNNSHIYHTVKHDTKRRGIDV-SGVSVNLSQMMKAKDDSVKSLTSGIEYLFKKNKVEYAKGTGSFIDPQTLSVKGIDGAADQTIKAKNFIIATGSEVK--PFPGVTIDEKKIVSSTGALSLSEVPKKMTVLGGGIIGLEMGSVWSRLGAEVTVV--EFLPAVGGPMDADISKALSRIISKQGIKFKTSTKLLSAKVNGDSVEVEIENMKNNKRETYQTDVLLVAIGRVP 319
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_HALSA (Dihydrolipoyl dehydrogenase OS=Halobacterium salinarium GN=lpdA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 67/241 (27.80%), Postives = 116/241 (48.13%), Query Frame = 1 Query: 7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAK--HILIATGSRAQRAP--IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG--VKRITDHGE--EIVADVVLFATGRAP 705 A GGTC+ GC+P K ++ + E A G V+ D D +++ K + +L G ++L GV L EG + G +++ V + S + + H +++TGSR P G + + S +AL++ ELP V++GGGYI +E ++++ +G V ++ + L + D++ V + E GI+ H +++G V + GE E + VL A GR P Sbjct: 42 AYGGTCLNYGCIPSKAMITASGVAHEAGHAEEMG--VYADPDVDVAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYEHAIVSTGSRPIEVPGFDFGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGVDVTVVEMLDGILPQYGDDIARPVRQRAEELGIDFHFGLAADSWTDTDDGIVVTAADEDGEETEFETEKVLVAVGRQP 280
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_CHLP8 (Dihydrolipoyl dehydrogenase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lpd PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 73/236 (30.93%), Postives = 117/236 (49.58%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQE----LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKR-ITDHGEE---IVADVVLFATG 696 GG CV GC+P K L+ A ++ +G V E + FD + +++ L+ + + +L A V+++ GE + G V+VT DG++ S A +I++ATG AQ IPG E ITS EAL L+++P+ +V+GGG I VE A + G+ V ++ L + E+ + R+ E I + + + SE GV + G+E I A +L A G Sbjct: 45 GGVCVNWGCIPTKALLRSAEVYDLAKNPSEFGVNVSE-LSFDLAQAVKRSRKVSLKSSKGVEFMLKKAKVEVWRGEAVLTGSKGVKVTAEDGSERSLEAANIIVATG--AQPRVIPGLEPDGKKIITSREALILKDVPESMIVVGGGAIGVEMAWFYAKAGAKVTIVELMPRLLPAEEAEVSEALKRSFEKVDITVQCGAKLGNVAISEFGVNADLLAEGKEPQKIEASCMLVAVG 277
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_SHIFL (Dihydrolipoyl dehydrogenase OS=Shigella flexneri GN=lpdA PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 73/239 (30.54%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHE-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 GG C+ GC+P K L++ A E + +G E K D D K+ K I +L G + VK+ G GK G N +EV +G K + + +IA GSR + P IP ++ I S +AL L+E+P+R +V+GGG I +E +++ +GS +D++ + + D ++ V + + + NL T + + E+G+ +T G++ A D VL A GR P Sbjct: 42 GGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDID--KIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENG-KTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRI-SKKFNLMLETKVTAVEAKEDGI-YVTMEGKKAPAEPQRYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_ECOLI (Dihydrolipoyl dehydrogenase OS=Escherichia coli (strain K12) GN=lpdA PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 73/239 (30.54%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHE-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 GG C+ GC+P K L++ A E + +G E K D D K+ K I +L G + VK+ G GK G N +EV +G K + + +IA GSR + P IP ++ I S +AL L+E+P+R +V+GGG I +E +++ +GS +D++ + + D ++ V + + + NL T + + E+G+ +T G++ A D VL A GR P Sbjct: 42 GGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDID--KIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENG-KTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRI-SKKFNLMLETKVTAVEAKEDGI-YVTMEGKKAPAEPQRYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_ECOL6 (Dihydrolipoyl dehydrogenase OS=Escherichia coli O6 GN=lpdA PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 73/239 (30.54%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHE-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 GG C+ GC+P K L++ A E + +G E K D D K+ K I +L G + VK+ G GK G N +EV +G K + + +IA GSR + P IP ++ I S +AL L+E+P+R +V+GGG I +E +++ +GS +D++ + + D ++ V + + + NL T + + E+G+ +T G++ A D VL A GR P Sbjct: 42 GGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDID--KIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENG-KTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRI-SKKFNLMLETKVTAVEAKEDGI-YVTMEGKKAPAEPQRYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_ECO57 (Dihydrolipoyl dehydrogenase OS=Escherichia coli O157:H7 GN=lpdA PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 73/239 (30.54%), Postives = 119/239 (49.79%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHE-KIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 GG C+ GC+P K L++ A E + +G E K D D K+ K I +L G + VK+ G GK G N +EV +G K + + +IA GSR + P IP ++ I S +AL L+E+P+R +V+GGG I +E +++ +GS +D++ + + D ++ V + + + NL T + + E+G+ +T G++ A D VL A GR P Sbjct: 42 GGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDID--KIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENG-KTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRI-SKKFNLMLETKVTAVEAKEDGI-YVTMEGKKAPAEPQRYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH2_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=bfmBC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 61/202 (30.20%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPN-------EVEVTQLDGTKLSYSA-KHILIATGSRAQRAPIPGQEL----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGI 582 GGTC+ +GC+P K L+ A +A +G E + +++K+ Q+K + +L L+ + +Y G G+I+GP+ + V + +G + K ++IATGSR + +PG E+ +TSDEAL +EELP+ +++GGG I +E+AS+ G V ++ + L D E+ + L+ +GI Sbjct: 39 GGTCLHKGCIPSKALLRSAEVYRTAREADQFGVET-AGVSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRM--LPGLEVDGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGI 237
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 7 AEGGTCVIRGCVPKKILVYGASFGGELE-DARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IP-GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 501 A GGTC+ GC+P K L++ + + YG E + D K+ Q+K + L G + L V Y+GEG + + V LDG + + K +IATGS P +P +++ ++S AL+L +PK VV+GGG I +E S+W +G+ V ++ Sbjct: 45 ALGGTCLNVGCIPSKALLHATHVYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAKVTVV 212 The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bpback to top |