CX295016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 74/249 (29.72%), Postives = 117/249 (46.99%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDA---RSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPI--PGQEL----AITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNL-EGRGINLHP---RTTIK-----ELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705 GGTCV RGC+P K L+ + E+ D + G +++ + F + + D + ++ L+ V G GK+ GP EV V + T++ AK I++ GS P PG E+ TSDEA+ LE LP+ ++G GYI +EF+ ++ +G V ++ + GFD E+ + R L + R I + T IK E+ ++ K + D + D L ATGR P Sbjct: 41 GGTCVNRGCIPSKALLAASGRVREMSDQDHLQQLGIQING-VTFTREAIAAHANDLVSKIQSDLTNSLTRLKVDTIRGWGKVSGPQEVTVIGDNETRI-LKAKEIMLCPGS----VPFVPPGIEIDHKTVFTSDEAVKLETLPQWIAIIGSGYIGLEFSDVYTALGCEVTMIEALPDLMPGFDPEIAKIAERVLIKSRDIETYTGVFATKIKAGSPVEIELTDAKTKEVID---TLEVDACLVATGRIP 280
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: YKGC_ECOLI (Probable pyridine nucleotide-disulfide oxidoreductase ykgC OS=Escherichia coli (strain K12) GN=ykgC PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 66/235 (28.09%), Postives = 114/235 (48.51%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRL-NGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705 GGTC+ GC+P K LV+ DA+ + D+ + +Q+K + + L N + L + + +G+ + + + + V + +G L + I I TG++ PIPG S L+L+ELP +LGGGYI VEFAS++ GS V +L L L D ++ +A L +G+++ ++ + E V+ ++H ++ D +L A+GR P Sbjct: 40 GGTCINIGCIPTKTLVH---------DAQQHT---------DFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGN-LEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHA-QLAVDALLIASGRQP 254
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 68/238 (28.57%), Postives = 113/238 (47.48%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGAS-FGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDE--ALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVK-RITD---HGEEIVADVVLFATGRAP 705 GGTC+ GC+P K L+ + F +G V + + D K+L++K D + ++ + L V L +G GK VG + E Q+D +AK ++IATGS+A+ P + + SD AL +PK+ V+G G I +E S+WR +GS V +L L D+ + + L +G+ + E+ + GV + TD + + D ++ + GR P Sbjct: 48 GGTCLNVGCIPSKALLASSEEFENVQHHLGDHGITVGD-VKVDVAKMLKRKDDIVGKMTKGIEFLFRKNKVTLLKGYGKFVGKS-AEGFQVDVAGEVVTAKQVIIATGSKARHLPGIKVDNDLVSDNEGALKFPAVPKKLGVIGAGVIGLELGSVWRRLGSDVTVLEALPAFLGAADEGVAKEAQKQLTKQGLKFSLGVNVNEVTTGKNGVTVKYTDKDGKAQTLEVDRLIVSVGRVP 283
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_CHLMU (Dihydrolipoyl dehydrogenase OS=Chlamydia muridarum GN=lpdA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 59/233 (25.32%), Postives = 114/233 (48.93%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELA---ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GGTC+ RGC+P K L+ A ++ A +G ++ D+ ++Q+K + + L+ + + ++ G G ++ EV++ L T A+ I++ATGS + P +P + + + S L+L+E+P++ ++GGG I EFAS++ +GS V ++ + L + ++ + GI ++ + + V R+T +G D VL + GR Sbjct: 39 GGTCLNRGCIPSKALLASAEIVAQIRHADQFGIHING-FSIDYPAMVQRKDTVVRSIRDGLNGLIRSNKITVFSGRGSLISSTEVKI--LGETPSVIKAQSIILATGSEPRAFPGVPFSQQSPRILCSTGVLNLKEIPQKMAIIGGGVIGCEFASLFHTLGSEVSVIEASQQILALNNPDISKTMFDKFTRHGIRFMLGASVSSIEDMGDRV-RLTINGNIEEYDYVLVSIGR 267
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: MERA_ACICA (Mercuric reductase OS=Acinetobacter calcoaceticus GN=merA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 72/235 (30.64%), Postives = 107/235 (45.53%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRL-NGIYKRLLS-NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705 GGTCV GCVP KI++ A ++ G D KLL ++ + L + Y+ +L N + + GE + + V DG + + L+ATG+ PIPG + + TS EAL + LP+R V+G +A+E A + +GS V +L R L R D + V GI + T ++ + T +G EI AD +L ATGRAP Sbjct: 133 GGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVEELRHAKYEGILDGNPAITVVHGEARFKDEQSLVVRLNDGGERVVAFDRCLVATGASPAVPPIPGLKESPYWTSTEALVSDTLPERLAVIGSSVVALELAQAFARLGSQVTILARNTLFFRD-DPAIGEAVTAAFRAEGIKVLEHTQASQVAHVDGEFVLTTGYG-EIRADQLLVATGRAP 365
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_COLP3 (Soluble pyridine nucleotide transhydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sthA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 65/231 (28.14%), Postives = 106/231 (45.89%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQE--LAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L S E + K ++ +L + I + + + V+ +G+ + + + ++ DG+ SAK I+IATGSR R + SD LSL+ P+ ++ G G I E+ASI+RG+G VDL+ +E L D EM ++ +L G+ + I+ + SE+ V G+++ AD +LFA GR Sbjct: 42 GGGCTHWGTIPSKALRQSVSRLIEYNSNPLFNQNEQVK-QLTFQDILSHASAVIQKQVSLRSGFYNRNRVEHIQGQASFIDAHTISISHPDGSVEKISAKQIMIATGSRPYRPDDIDFDHPRVYDSDSILSLKHAPQHVIIYGAGVIGSEYASIFRGLGVKVDLINTRERLLSFLDTEMSDSLSYHLWNSGVVIRHGEEIERVESSEDAVIVHLKSGKKMRADCLLFANGR 271
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_VIBVY (Soluble pyridine nucleotide transhydrogenase OS=Vibrio vulnificus (strain YJ016) GN=sthA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 64/235 (27.23%), Postives = 111/235 (47.23%), Query Frame = 1 Query: 1 DSAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QRAPIP-GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 +S+ GG C G +P K L + S E + + + + + +L I + + + +L G + + + VTQ DGT+ Y+A +IATGSR Q A + E SD LSL+ P+ ++ G G I E+ASI+RG+G DL+ ++ L D+E+ ++ + G+ + T + + +E+GV G+++ AD +L+A GR Sbjct: 38 ESSVGGGCTHWGTIPSKALRHAVSRIIEFNSNPLF-CKNNSSLHATFSTILGHAKSVIDKQTRLRQGFYDRNQCQLIFGTARFTDAHTISVTQNDGTEEVYTADKFVIATGSRPYQPADVDFNHERIYDSDSILSLKHDPRHIIIYGAGVIGCEYASIFRGLGVKTDLINTRDRLLAFLDNEVSDALSYHFWNSGVVIRNDETYERIEGTEDGVIVHLQSGKKMKADCLLYANGR 271
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_VIBVU (Soluble pyridine nucleotide transhydrogenase OS=Vibrio vulnificus GN=sthA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 64/235 (27.23%), Postives = 111/235 (47.23%), Query Frame = 1 Query: 1 DSAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QRAPIP-GQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 +S+ GG C G +P K L + S E + + + + + +L I + + + +L G + + + VTQ DGT+ Y+A +IATGSR Q A + E SD LSL+ P+ ++ G G I E+ASI+RG+G DL+ ++ L D+E+ ++ + G+ + T + + +E+GV G+++ AD +L+A GR Sbjct: 38 ESSVGGGCTHWGTIPSKALRHAVSRIIEFNSNPLF-CKNNSSLHATFSTILGHAKSVIDKQTRLRQGFYDRNQCQLIFGTARFTDAHTISVTQNDGTEEVYTADKFVIATGSRPYQPADVDFNHERIYDSDSILSLKHDPRHIIIYGAGVIGCEYASIFRGLGVKTDLINTRDRLLAFLDNEVSDALSYHFWNSGVVIRNDETYERIEGTEDGVIVHLQSGKKMKADCLLYANGR 271
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_VIBF1 (Soluble pyridine nucleotide transhydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sthA PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 66/231 (28.57%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L + S E Y + + + + +L I + + + L GE V N V VT DG+ +Y+A +IATGSR R SD LSL+ P+ ++ G G I E+ASI+RG+G VDL+ ++ L D+EM ++ + GI + + +++GV + G+++ AD +LFA GR Sbjct: 47 GGGCTHWGTIPSKALRHAVSRIIEFNSNPLY-CKNNTSLHSTFSDILGHAKSVIDKQTRMRQGFYDRNQCSLIFGEASFVEKNTVAVTAKDGSIETYTADKFIIATGSRPYRPEGINFNHSRVYDSDSILSLKHDPRHIIIYGAGVIGSEYASIFRGLGVKVDLVNTRDRLLSFLDNEMSDALSYHFWNSGIVTRNDENFEHIEANDDGVIMHLESGKKMKADCILFANGR 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_VIBPA (Soluble pyridine nucleotide transhydrogenase OS=Vibrio parahaemolyticus GN=sthA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 63/235 (26.81%), Postives = 109/235 (46.38%), Query Frame = 1 Query: 1 DSAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 +S+ GG C G +P K L + S E + + + + +L I + + + L G + + + + V Q DGT+ +YSA +IATGSR R E SD LSL+ P+ ++ G G I E+ASI+RG+G DL+ ++ L D+E+ ++ + G+ + T +++ +E+GV G+++ AD +L+A GR Sbjct: 38 ESSVGGGCTHWGTIPSKALRHAVSRIIEFNSNPLF-CRNNTSLHATFSDILGHAKTVIDKQTRLRQGFYDRNDCTLLFGTARFIDTHSIAVMQNDGTEETYSADKFVIATGSRPYRPSDVDFLHERIYDSDSILSLKHDPRHIIIYGAGVIGCEYASIFRGLGVKTDLINTRDRLLEFLDNEVSDALSYHFWNSGVVIRNDETYEKIEGTEDGVIIHLQSGKKMRADCLLYANGR 271 The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bpback to top |