CX295016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_YERE8 (Soluble pyridine nucleotide transhydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sthA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 60/231 (25.97%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L + S E Y + I + +L I + + + +++ G+ + N + V DGT + A +I+IATGSR R E SD L L P+ ++ G G I E+ASI+RG+ VDL+ ++ L D EM ++ + G+ + +++ + +GV G+++ AD +L+A GR Sbjct: 42 GGGCTHWGTIPSKALRHAVSRIIEFNQNPLYS-DNARTISSSFSDILNHADRVINQQTRMRQGFYDRNHCQMFSGDASFIDANTINVRYADGTNDTLRADNIVIATGSRPYRPANVDFTHERIYDSDTILQLSHEPQHVIIYGAGVIGCEYASIFRGLSVKVDLINTRDRLLAFLDQEMSDALSYHFWNNGVVIRHNEEFEQIEGTVDGVIVHLKSGKKVKADCLLYANGR 271
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_PHOLL (Soluble pyridine nucleotide transhydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=sthA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 68/243 (27.98%), Postives = 102/243 (41.98%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRL------------NGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L + S E Y D ++L+ EILR G Y+R G +++ GE + + V V D SA I+IATGSR P SD L L+ P+ ++ G G I E+ASI+RG+G VDL+ + L D EM ++ + GI + ++ ++GV G+++ AD +L+A GR Sbjct: 41 GGGCTHWGTIPSKALRHAVSRIIEFNQNPLYS---------DNSRVLRSSFAEILRRAEMVINQQTRMRQGFYER----NGCRMFSGEATFIDDHRVSVRYADDNHDILSADKIIIATGSRPYCPPDVDFTHSRIYNSDSILKLDHEPRHVIIYGAGVIGCEYASIFRGLGVKVDLINTRNHLLAFLDQEMSDALSYHFWNSGIVIRHNEEYSKIEGVDDGVIVHLKSGKKVKADCLLYANGR 270
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: MERA_THIFE (Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 73/240 (30.42%), Postives = 105/240 (43.75%), Query Frame = 1 Query: 4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLL---QKKTDEILRLNGIYKRLLS-NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705 S GGTCV GCVP KI++ A ++ G LL Q + DE+ Y+ +L N + + GE + V V DG + L+ATG+ PIPG + TS E L E +P+R V+G +A+E A + +GS V +L R L LR D + + GI + T ++ ++ T HG E+ AD +L ATGRAP Sbjct: 116 STIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIQAVAPTIQRTALLVQQQARVDELRHAK--YEGILDGNPAITVLRGEARFKDSRSVVVHLNDGGERVVMFDRCLVATGASPAVPPIPGLKDTPYWTSTEGLVSESIPERLAVIGSSVVALELAQAFARLGSHVTILARGTLFLRE-DPAIGEAITAAFRAEGIEVLEHTQASQVAYADGEFVLATGHG-ELRADKLLVATGRAP 351
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_HAMD5 (Soluble pyridine nucleotide transhydrogenase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=sthA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT------SDEALSL--EELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L + S E Y E + I + +LQ I + + L+ G + + P ++EV + DGT + SA HI+IATGSR P + + T SD L L E+ PK ++ G G I E+ASI+RG+G VDL+ + L D E+ ++ + G+ + + ++GV G+++ AD + +A GR Sbjct: 42 GGGCTHSGTIPSKALRHVISRIIEFNQNPLYS-EHLQSIHPSFYHILQHANHVIRKQVSMRFDFYQRNHCHLFFGHARFIDPYKLEVIRPDGTLNTLSADHIVIATGSR----PYHPESIDFTHPRIYDSDSILELKEEQQPKHIIIYGAGVIGCEYASIFRGLGVKVDLINTRNHLLAFLDQEISDALSYHFWNNGVVIRHNEEFDLIEGLDQGVVVHLKSGKKVKADCLFYANGR 273
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_MARMS (Soluble pyridine nucleotide transhydrogenase OS=Marinomonas sp. (strain MWYL1) GN=sthA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 66/235 (28.09%), Postives = 105/235 (44.68%), Query Frame = 1 Query: 4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRA 702 S GG+C G +P K L + + ++ E F + K+L + I + + + +Y G GK N +EV + AK ++IATGSR R A I I SD LSL P+ ++ G G I E+ASI+ G+G V+L+ + L DDE+ ++ +L G+ + T + +E GV G+++ AD +LF GR+ Sbjct: 38 SQVGGSCTHLGTIPSKALRHAVKEIIAFNTNPMFR-DIGEPRWFSFPKVLDRANRVIDKQVMGRTEYYARNRIDIYFGRGKFKDANTIEVNTYEKGPELLEAKKVVIATGSRPYRPANIDFSHPRIYCSDTILSLSHTPRSLIIYGAGVIGCEYASIFCGLGVRVELINPAKKLLSFLDDEITDALSYHLRDGGVLIRHNETYDSVETTERGVVMHMASGKKLRADALLFCNGRS 271
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_VIBPA (Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyticus GN=lpd PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 63/241 (26.14%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVA-----DVVLFATGRAP 705 S GG C+ GC+P K L++ + E + +G V + D K+ K + +L G + V + G GK GPN + V + +G + + ++A GSR + P IP ++ I S +AL L+E+P++ +++GGG I +E +++ +GS V+++ + + D ++ V + ++ + L T + + E+G+ ++ G++ A D VL A GR P Sbjct: 39 STLGGVCLNVGCIPSKALLHVSKVIEEAKAMADHG-VVFGEPQTDINKIRIWKEKVVNQLTGGLSGMAKMRNVTVVNGYGKFTGPNSILV-EGEGESTVVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLIMGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDK-FKLMLETKVTAVEAKEDGI-YVSMEGKKAPAEAERYDAVLVAIGRVP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_HAHCH (Soluble pyridine nucleotide transhydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=sthA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 1 Query: 4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQ-LDGTKLSYSAKHILIATGSRAQRAPIPGQELAIT------SDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 S GG C G +P K L + + + ++ E F + ++LQ I + I + + V LY G + N +EV L+G ++ Y K I+IATGSR P +++ T SD L L P+ ++ G G I E+ASI+ G+G VDL+ E L D E+ ++ +L G+ + ++ + GV G+ I AD L+ GR Sbjct: 38 SQVGGNCTHMGTIPSKALRHAVKQIIQFNTNTMFR-DIGEPRWFSFPRVLQNAERVIGKQVKIRTQFYARNRVDLYRGRASFIDENRIEVRGGLNGKEVLYG-KQIVIATGSR----PYLPEDVDFTHRRIYNSDSILKLSHTPRTLIIYGAGVIGCEYASIFVGLGVKVDLINPGERLLSFLDGEISDALSYHLRDNGVLVRHNEQYDSVVGDDHGVVLTMKSGKRIRADAFLWCNGR 270
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_BUCAI (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=lpdA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 63/237 (26.58%), Postives = 117/237 (49.37%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDH----GEEIVADVVLFATGRAP 705 GG C+ GC+P K L++ A E ++ G + K D D KK+ K + +L + +++++G + VT + K + + +IATGS+ + P IP ++ I S +ALSL+++P +++G G I +E A+I+ +GS VD++ R L D+++ ++ +++ + NL T I ++ ++ + H + I+ D VL A GR P Sbjct: 42 GGVCLNVGCIPSKTLLHIAKVIKEAKELHKTGVSFN-KPDIDIKKIKNWKQHIVNKLTDGLSSMRKKRKIRIFQGHAIFETDKSLCVTNTED-KFTIFFDNAIIATGSKPIKIPSIPHDDIRIWDSTDALSLKKIPNNFLIIGSGIIGLEMATIYSALGSKVDIIDRFNHFLPVIDEDISSIYKKSI-NQQFNLMLNTHIDKVEVKKDALIVDMIHENIPKKNILYDAVLVAIGRTP 275
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: MERA_ENTAG (Mercuric reductase OS=Enterobacter agglomerans GN=merA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 67/235 (28.51%), Postives = 107/235 (45.53%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRL-NGIYKRLLS-NAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAI--TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705 GGTCV GCVP KI++ A ++ G ++LL ++ + L + Y+ +L N+ + + GE + + V+ +G + L+ATG+ PIPG + + TS EAL+ + +P+R V+G +A+E A + +GS V L R L R D + V GI + T ++ + T HG E+ AD +L ATGR P Sbjct: 133 GGTCVNVGCVPSKIMIRVAHIAHLRRESPFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTALARNTLFFRE-DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHG-ELRADKLLVATGRTP 365
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: STHA_PSEMY (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas mendocina (strain ymp) GN=sthA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGR 699 GG C G +P K L + + + ++ E F + +L K +++ I K++ S G + Y G VEV L+G AK I+IATGSR R A + + I SD LSL P+R ++ G G I E+ASI+ G+G VDL+ ++ L D E+ ++ +L + + + + E GV G++I AD +L+ GR Sbjct: 41 GGNCTHLGTIPSKALRHSVRQIMQFNTNPMFR-QIGEPRWFSFPDVL-KSAEKV-----IAKQVTSRTGYYARNRIDTYFGTASFADEQTVEVVCLNGVVEKLVAKQIVIATGSRPYRPADVDFRHPRIYDSDTILSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDSEISDALSYHLRNNNVLIRHNEEYERIEGVENGVVLHLKSGKKIKADALLWCNGR 270 The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bpback to top |