CX295160

Overview
NameCX295160
Unique NameCX295160
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig619 contig Ccv1_Contig619:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295160 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  313 PWHDIPLQLGDG---VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDP 702
            PWHD  L++G G   VFN VVEIP+ S  K E+  D+    IK D        YP+N    YG  P+T  +             D DP+DV+ + + +   G  LR + +  + MID+GE D KI+A+  DDP
Sbjct:   37 PWHD--LEIGPGAPAVFNCVVEIPRGSKVKYEL--DKATGLIKVDRVLYSSVVYPHN----YGFIPRTLCE-------------DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDP 148          
BLAST of CX295160 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSI (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. indica GN=IPP PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  313 PWHDIPLQLGDG---VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDP 702
            PWHD  L++G G   VFN VVEIP+ S  K E+  D+    IK D        YP+N    YG  P+T  +             D DP+DV+ + + +   G  LR + +  + MID+GE D KI+A+  DDP
Sbjct:   37 PWHD--LEIGPGAPAVFNCVVEIPRGSKVKYEL--DKATGLIKVDRVLYSSVVYPHN----YGFIPRTLCE-------------DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDP 148          
The following BLAST results are available for this feature:
BLAST of CX295160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
IPYR_ORYSJ5.095e-1136.84Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]
IPYR_ORYSI5.095e-1136.84Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC05069C01SK PhIFruit1 Citrus clementina cDNA clone C05069C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295160 ID=CX295160; Name=CX295160; organism=Citrus clementina; type=EST; length=715bp
GAGGCAATCTCCAAAACTCATTCCACTTTCTCACTCACTCCCACTCACAG
TCGCCAGTCAGCAGCCATGGCAGCCGCAAAAGCGATAAGCCAAACCACTT
CTTGCTTGCTGTCCAAAACACCCTTTGCTCTGAAACACAAATCCCACATC
ACAAATCTTTGCTTTGGTACCAAAGGAGTTGCTTTTCCGTCAAAGAGGCT
GTTTTCATGTAGGGCTATTTATAATCCTCAGGTTCAAATCACAGAGGAGG
GCCAGCCTGAAACTCTAGATTACAGAGTCTTTTTCGTCAACAATTCTGGC
AAAAAGGTTTCTCCCTGGCATGACATACCGCTGCAATTGGGTGACGGTGT
TTTCAACTTTGTTGTTGAAATACCCAAAGAATCAAGTGCAAAGATGGAGG
TTGCTACTGATGAGCTATACACCCCTATTAAACAGGATATAAAGAAGGGG
AAGCTTCGATACTACCCATACAACATAAATTGGAATTATGGATTGTTTCC
ACAAACATGGGAAGATCCATCTTTTGCAAACTCTGAAGTTGAAGGGGCAT
TTGGGGATAATGATCCAGTTGATGTTGTTGAGATTGGTGAAAGAAGGAGA
AAGATTGGTGAAATTCTTAGGGTCAAGCCCTTGAGTGCCTTAGCCATGAT
TGATGAAGGTGAACTTGACTGGAAAATAGTGGCAATTTCATTGGATGATC
CAAGGCTGCCCTTGT
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