CX295733

Overview
NameCX295733
Unique NameCX295733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length650
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6443 contig Ccv1_Contig6443:880..1529. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGL2_BACTQ (Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 77/191 (40.31%), Postives = 116/191 (60.73%), Query Frame = 3
Query:    3 GGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNF 572
            GG  D+Y FAGP+P  V++QYT   GR    P W+LG+HQ R+ Y     V ++ + + +  IPLDVI+ D  +M+G++ FT +   +P  K L  +  + + G++ + I+DPG+  +  Y +YQ GI +D F KY EG  Y  +VWPG   FPDF N K   WWG++  +F+  + ++G+W DMNE S F
Sbjct:  227 GGAIDYYVFAGPTPKDVLEQYTDLTGRMPLPPKWALGYHQSRYSYETEQEVREIAQTFIEKDIPLDVIYLDIHYMNGYRVFTFDRNRFPNLKQL--IADLKQKGIRVVPIVDPGVKEDPEYVIYQEGIRHDYFCKYIEGNVYFGEVWPGKSAFPDFTNKKVRKWWGEK-HQFYTDLGIEGIWNDMNEPSVF 414          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: YFZB_SCHPO (Uncharacterized family 31 glucosidase C1039.11c OS=Schizosaccharomyces pombe GN=SPAC1039.11c PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.088e-38
Identity = 79/222 (35.59%), Postives = 119/222 (53.60%), Query Frame = 3
Query:    3 GGVFDFYFFAG--PSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI----GVNSS---YGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHEL--------VPVDGLWIDMNEASNFCSGLCKIPKGKQCP 614
            GG+ D Y + G   +P   V Q+   +G PA   +W+ GFH CRWGY N+  + +V EN+K  +IP+D  W+D D+M  ++DFT+    +P+ K++ F   + +    Y+ IID  I     +N S   Y  Y  G+  D+F++  +   Y+  VWPG   FPDF NP+T ++W + +              +P  GLWIDMNE ++FC G C   K  Q P
Sbjct:  299 GGIVDLYIYVGGTKNPKDTVSQFVQSVGTPAMQQHWTFGFHICRWGYKNVFDLVEVKENFKNFEIPVDTFWSDIDYMYEYRDFTVESNAFPKDKMMEFFNSLQQSNQHYVPIIDAAIYAANPINRSDDVYYPYYEGVRRDIFLRNPDRSLYVGNVWPGFTTFPDFTNPETTNYWTECLMNLSAAFGYNSSFPLPYSGLWIDMNEPTSFCIGSCGTDKLDQNP 520          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGLU_ASPOR (Alpha-glucosidase OS=Aspergillus oryzae GN=agdA PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.166e-38
Identity = 77/203 (37.93%), Postives = 119/203 (58.62%), Query Frame = 3
Query:    3 GGVFDFYFFAGPSPLAVVDQYT-AFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI------GVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLC 587
            GG  D  F++GP+   V  QY  + +G PA   Y +LGFHQCRWGY+N S  EDV+ N+++ +IPL+ +W D D+M G+++F  +   +   +   FL K+H  G +++ I+D  +        + +Y  Y RG  +DVFIK  +G  Y+  VWPG   +PD+ +PK   +W +E+  +   +  DG+W DM E S+FC G C
Sbjct:  302 GGSVDLTFYSGPTQAEVTKQYQLSTVGLPAMQQYNTLGFHQCRWGYNNWSEFEDVLANFERFEIPLEYLWADIDYMHGYRNFDNDQHRFSYEEGEKFLNKLHAGGRRWVPIVDGALYIPNPENASDAYETYDRGAKDDVFIKNPDGSLYIGAVWPGYTVYPDWHHPKASDFWANELVTWWNKLHYDGVWYDMAEVSSFCVGSC 504          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGLU_CANTS (Alpha-glucosidase OS=Candida tsukubaensis PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.136e-38
Identity = 85/220 (38.64%), Postives = 112/220 (50.91%), Query Frame = 3
Query:    3 GGVFDFYFFAGP---------------------SPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI--GVNSSYGVY---QRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSG 581
            GG  DF FF+G                      SP   + QY  FIG P   PYWS GFH CRWGY+N+S  + V++  ++  IPL+V WND D++   +DFT +P  +P+ +  A + K+      YI IID  I     +   VY    RG   DVFIK   G  Y+ +VWPG  NF D        WW + IR F E+V   G+W+DMNE S+F  G
Sbjct:  317 GGTLDFRFFSGDQPASSSSSSSGNDKAVATVKNSPNTAIQQYVNFIGNPVIHPYWSYGFHLCRWGYNNVSETQAVIDAMRQNNIPLEVQWNDIDYLQEFRDFTTDPQRFPQKEFAAMIAKLKDNHQHYIPIIDMAIPKAPTNDTDVYYPGTRGDELDVFIKNRNGSQYIGEVWPGYTNFVDQQAENAGKWWTEAIRNFSEIVDFSGIWLDMNEPSSFVIG 536          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: MGAL2_HUMAN (Putative maltase-glucoamylase-like protein LOC93432 OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37
Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 3
Query:    3 GGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI 548
            GG+ DFY F G +P  VV +Y   +GRP   PYWSLGF   R  Y  ++ +++VV   + A+IP DV ++D D+MDG KDFT++   Y    L  F++++H  G KY++I++PGI  NS+Y  Y  G    V+I       + + +PG   FPD+ NP    WW D++ +FH+ +  DG+WI
Sbjct:  298 GGILDFYVFLGNTPEQVVQEYLELVGRPFFPPYWSLGFQLSRRDYGGINKLKEVVSRNRLAEIPYDVQYSDIDYMDGKKDFTVDEVAY--SGLPDFVKELHDNGQKYLIIMNPGISKNSNYEPYNNGSLKRVWILGSNGFAVGEGYPGPTVFPDYTNPVCTEWWTDQVAKFHDHLEFDGVWI 477          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: MGAL1_HUMAN (Putative maltase-glucoamylase-like protein FLJ16351 OS=Homo sapiens PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.534e-35
Identity = 87/224 (38.84%), Postives = 118/224 (52.68%), Query Frame = 3
Query:    3 GGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI-GVNSSYGVYQRGIANDVFIKY--EGEPYLAQVWPGAVN---------------------FPDFLNPKTVSWWGDEIRRFH-------ELVPVDGLWIDMNEASNFCSG 581
            GG+ DFY   GP+P  V  QYT  IGRPA +PYW+LGFH  R+GY N + +  + +    A+IP DV   D D+M+   DFTL+  N+    LL  +E++ K GM++I+I+DP I G  + Y  + RG  N+VFIK+    +    +VWP   N                     FPDF    T +WW  EI   +       + +  DGLWIDMNE SNF  G
Sbjct:   92 GGILDFYIVLGPTPELVTQQYTELIGRPAMIPYWALGFHLSRYGYQNDAEISSLYDAMVAAQIPYDVQHVDIDYMNRKLDFTLS-ANFQNLSLL--IEQMKKNGMRFILILDPAISGNETQYLPFIRGQENNVFIKWPDTNDIVWGKVWPDLPNVIVDGSLDHETQVKLYRAYVAFPDFFRNSTAAWWKKEIEELYANPREPEKSLKFDGLWIDMNEPSNFVDG 312          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: YAJ1_SCHPO (Uncharacterized family 31 glucosidase C30D11.01c OS=Schizosaccharomyces pombe GN=SPAC30D11.01c PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.522e-32
Identity = 72/213 (33.80%), Postives = 106/213 (49.77%), Query Frame = 3
Query:    3 GGVFDFYFFAGP--SPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI-------GVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEI--------RRFHELVPVDGLWIDMNEASNFCSGLC 587
            GG+ D + ++G   SP   + QY   IG P   PYWSLGF   RWGY  LS + ++      + IP +  WND D+M   + FT+N T +P  + L F   + +    Y+ ++DP I         + +Y  Y  G  +++FIK   G  Y+   WPG V +PDF NP  + +W   I          +   +P  GL +DMNE ++FC G C
Sbjct:  301 GGIIDLFVYSGSTVSPKYTIQQYVQSIGTPTMQPYWSLGFQMSRWGYKTLSDLINMRSYLNASNIPTEGFWNDIDYMSEFRTFTVNSTAFPPNQTLDFFRSLDESHQHYVPVLDPAIYAANPNKSADRTYYPYYSGFEDNIFIKNPNGSAYVGMAWPGFVVYPDFTNPAVLQYWKQGILNLSTAFGSNYSYDLPFSGLCLDMNEPTSFCIGSC 513          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANAB_PIG (Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30
Identity = 71/192 (36.98%), Postives = 104/192 (54.17%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGL--WIDMNEASNF 572
            G+ D +   GPS   V  QY +  G  A  P +SLG+HQ RW Y + + V +V + +    +P D IW D +H DG + FT +P+ +P+P+ +  LE +     K + I+DP I V+SSY V++      +++K  +G  Y    WPGA ++PDF NPK  +WW D  R  +       L  W DMNE S F
Sbjct:  360 GIIDVFLLLGPSVFDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVNQGFDDHNLPCDFIWLDIEHADGKRYFTWDPSRFPQPRTM--LEHLASKRRKLVAIVDPHIKVDSSYRVHEELQNLGLYVKTRDGSDYEGWCWPGAASYPDFTNPKMRAWWADMFRFENYEGSSSNLYVWNDMNEPSVF 549          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANAB_MOUSE (Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30
Identity = 69/192 (35.94%), Postives = 104/192 (54.17%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GPS   V  QY +  G  A  P +SLG+HQ RW Y + + V +V + +    +P DVIW D +H DG + FT +PT +P+P  L  LE +     K + I+DP I V+S Y V++    + +++K  +G  Y    WPG+ ++PDF NP+  +WW +      +    P   +W DMNE S F
Sbjct:  360 GIIDVFLMLGPSVFDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNMPCDVIWLDIEHADGKRYFTWDPTRFPQP--LNMLEHLASKRRKLVAIVDPHIKVDSGYRVHEELRNHGLYVKTRDGSDYEGWCWPGSASYPDFTNPRMRAWWSNMFSFDNYEGSAPNLYVWNDMNEPSVF 549          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANAB_MACFA (Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.687e-29
Identity = 67/192 (34.90%), Postives = 103/192 (53.65%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GPS   V  QY +  G  A  P +SLG+HQ RW Y + + V +V + + +  +P DVIW D +H DG + FT +P+ +P+P+ +  LE++     K + I+DP I V+S Y V+       +++K  +G  Y    WPG+  +PDF NP   +WW +      +    P   +W DMNE S F
Sbjct:  360 GIIDVFLLLGPSISDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDEHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTM--LERLASKRRKLVAIVDPHIKVDSGYRVHDELRNLGLYVKTRDGSDYEGWCWPGSAGYPDFTNPTMRAWWANMFSYDNYEGSAPNLFVWNDMNEPSVF 549          
The following BLAST results are available for this feature:
BLAST of CX295733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AGL2_BACTQ1.679e-3940.31Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefa... [more]
YFZB_SCHPO1.088e-3835.59Uncharacterized family 31 glucosidase C1039.11c OS... [more]
AGLU_ASPOR3.166e-3837.93Alpha-glucosidase OS=Aspergillus oryzae GN=agdA PE... [more]
AGLU_CANTS4.136e-3838.64Alpha-glucosidase OS=Candida tsukubaensis PE=1 SV=... [more]
MGAL2_HUMAN7.799e-3740.11Putative maltase-glucoamylase-like protein LOC9343... [more]
MGAL1_HUMAN9.534e-3538.84Putative maltase-glucoamylase-like protein FLJ1635... [more]
YAJ1_SCHPO1.522e-3233.80Uncharacterized family 31 glucosidase C30D11.01c O... [more]
GANAB_PIG1.425e-3036.98Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANA... [more]
GANAB_MOUSE1.425e-3035.94Neutral alpha-glucosidase AB OS=Mus musculus GN=Ga... [more]
GANAB_MACFA2.687e-2934.90Neutral alpha-glucosidase AB OS=Macaca fasciculari... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075C11SK DroRLeaf1 Citrus clementina cDNA clone C05075C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295733 ID=CX295733; Name=CX295733; organism=Citrus clementina; type=EST; length=650bp
TTGGGGGTGTTTTCGACTTTTACTTCTTCGCTGGGCCTTCACCGCTTGCT
GTTGTTGATCAGTATACAGCATTTATTGGGAGGCCTGCTCCTATGCCTTA
CTGGTCTCTAGGATTCCACCAGTGCAGATGGGGTTACCATAACCTGTCTG
TGGTCGAAGATGTTGTTGAGAACTACAAGAAGGCTAAAATTCCACTTGAT
GTGATCTGGAATGATGATGATCACATGGACGGACACAAGGATTTCACTCT
CAATCCTACCAACTATCCTCGTCCGAAGCTTTTGGCATTCCTTGAAAAAA
TACATAAAATAGGCATGAAATACATTGTCATTATTGACCCTGGAATTGGA
GTAAATTCTAGCTATGGTGTGTATCAAAGAGGTATAGCGAATGATGTTTT
CATCAAGTATGAGGGTGAACCCTACTTGGCTCAAGTTTGGCCTGGGGCTG
TCAATTTTCCTGACTTCCTCAATCCAAAAACCGTTTCATGGTGGGGTGAT
GAAATTCGCCGCTTTCATGAACTTGTCCCTGTAGATGGCTTGTGGATTGA
CATGAATGAAGCTTCAAATTTCTGTTCTGGACTTTGCAAAATACCTAAGG
GCAAGCAATGTCCAACTGGGACTGGACCCGGTTGGGTCTGTTGCTTGGAC
back to top