CX295733

Overview
NameCX295733
Unique NameCX295733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length650
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6443 contig Ccv1_Contig6443:880..1529. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANAB_HUMAN (Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 2.687e-29
Identity = 67/192 (34.90%), Postives = 103/192 (53.65%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GPS   V  QY +  G  A  P +SLG+HQ RW Y + + V +V + +    +P DVIW D +H DG + FT +P+ +P+P+ +  LE++     K + I+DP I V+S Y V++      +++K  +G  Y    WPG+  +PDF NP   +WW +      +    P   +W DMNE S F
Sbjct:  360 GIIDVFLLLGPSISDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTM--LERLASKRRKLVAIVDPHIKVDSGYRVHEELRNLGLYVKTRDGSDYEGWCWPGSAGYPDFTNPTMRAWWANMFSYDNYEGSAPNLFVWNDMNEPSVF 549          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGLU_TETPY (Lysosomal acid alpha-glucosidase OS=Tetrahymena pyriformis PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.817e-29
Identity = 72/227 (31.72%), Postives = 116/227 (51.10%), Query Frame = 3
Query:    3 GGVFDFYFFAGP-SPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGV-------NSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD---EIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQC----PTGTGPGWV 638
            GG+ +F  F G  SP   +  Y +++      P+W+ GFHQCRWGY    ++  V + +    +P D IW+D D+M    DFT++ + Y + ++   L++    G+ ++ IID GI +           GVYQ+           GE  +  VWPG VN+PDF +P +  +W +    + + + + P  G WIDMNE SNF +G  +I + + C     T T P ++
Sbjct:  270 GGLLEFKIFLGDKSPETSLKLYHSYVNGFNLHPFWAHGFHQCRWGYKTSEMMTTVWDTFNTNGLPFDTIWSDIDYMKDLTDFTIDTSRYDKAQMNTMLDRSVAAGVHWVPIIDAGIALGDVSNERGKELGVYQKS-------NKTGEDLIGCVWPGKVNYPDFNHPLSQEFWAEGLMNLTKNYGITP-SGFWIDMNEFSNFING--EISEDQNCIMPGDTTTNPNYL 486          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANC_HUMAN (Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.474e-27
Identity = 67/192 (34.90%), Postives = 96/192 (50.00%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GP+P  V  QY+   G  A  P +SLG+HQCRW Y +   V+ V   + +  IP D +W D +H +G + FT +   +P PK +  L +  K   K +VI DP I ++  Y VY +      F+K  EGE +    WPG  ++ DF NPK   W+        +     +  LW DMNE S F
Sbjct:  329 GIIDVFLLTGPTPSDVFKQYSHLTGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFPNPKRMQELLRSKK--RKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVF 518          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GLU2A_SCHPO (Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe GN=gls2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.290e-27
Identity = 69/193 (35.75%), Postives = 99/193 (51.30%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEG--EPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI--DMNEASNF 572
            G  D + F GP    V + Y+A +GRP   P +S+G+HQCRW Y +   V +V   + +  +P D IW D ++    + FT +   +P PK  A LEK+     K IVI+DP I  + +Y V +  I  +  +K +   + Y A  WPG   + DF NP+  +WWG  +  F        LWI  DMNE S F
Sbjct:  342 GTLDLFIFLGPKASDVYESYSALVGRPLLPPLFSIGYHQCRWNYVSEEDVLNVDAKFDEVDMPYDTIWLDIEYASKRRYFTWDKATFPNPK--AMLEKLDSKSRKLIVILDPHIKNDPNYFVSKELIDYNYAVKDKSGVDNYNADCWPGNSVWVDFFNPEAQAWWG-SLYEFDRFESDKNLWIWNDMNEPSVF 531          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANC_MACFA (Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27
Identity = 66/192 (34.38%), Postives = 96/192 (50.00%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GP+P  V  QY+   G  A  P +SLG+HQCRW Y +   V+ V   + +  IP D +W D +H +G + FT +   +P P+ +  L +  K   K +VI DP I ++  Y VY +      F+K  EGE +    WPG  ++ DF NPK   W+        +     +  LW DMNE S F
Sbjct:  184 GIIDVFLLTGPTPSDVFKQYSHLTGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKKRFPNPERMQELLRSKK--RKLVVISDPHIKIDPDYSVYVKAKDQGFFVKNQEGEDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVF 373          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANAB_DICDI (Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27
Identity = 66/195 (33.85%), Postives = 102/195 (52.31%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKY---IVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEI--RRFHELVPVDGLWIDMNEASNF 572
            G+ D ++  GP+P  +  QY    G  A    +SLG+HQC+W Y +   V+ V   + +  IP DVIW D +H DG + FT +  N+P P   A ++ I  IG K+   + I+DP I  +++Y V+    +   +IK  +G  Y    WPG+ ++ DF NP+   WW  +    ++    P   +W DMNE S F
Sbjct:  358 GIIDVFYLTGPTPSTIFKQYAYLTGTTALPQMFSLGYHQCKWNYKSEDDVKQVDNGFDENHIPYDVIWLDIEHTDGKRYFTWDNNNFPTP---ADMQNI--IGAKHRKMVTIVDPHIKRDNNYYVHSEATSKGYYIKNKDGNDYDGWCWPGSSSYLDFTNPEIRKWWATQFGYDKYKGSTPNLYIWNDMNEPSVF 547          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGLU_SULSO (Alpha-glucosidase OS=Sulfolobus solfataricus GN=malA PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.090e-26
Identity = 61/186 (32.80%), Postives = 102/186 (54.84%), Query Frame = 3
Query:   15 DFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNF 572
            +FY   GP    V+++YT   G+P   P W+ G+   R+ Y+    V ++V+  +K    +  ++ D  +MD +K FT +P  +P PK L  ++++HK  +K I I+D GI V+ +Y  +  G+     I+  GE ++ ++WPG   +PDF    T  WW   I  +     VDG+W+DMNE ++F
Sbjct:  146 EFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEPKKL--IDELHKRNVKLITIVDHGIRVDQNYSPFLSGMGKFCEIE-SGELFVGKMWPGTTVYPDFFREDTREWWAGLISEWLS-QGVDGIWLDMNEPTDF 327          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: AGLU_SULS9 (Alpha-glucosidase OS=Sulfolobus solfataricus (strain 98/2) GN=malA PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.090e-26
Identity = 61/186 (32.80%), Postives = 102/186 (54.84%), Query Frame = 3
Query:   15 DFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNF 572
            +FY   GP    V+++YT   G+P   P W+ G+   R+ Y+    V ++V+  +K    +  ++ D  +MD +K FT +P  +P PK L  ++++HK  +K I I+D GI V+ +Y  +  G+     I+  GE ++ ++WPG   +PDF    T  WW   I  +     VDG+W+DMNE ++F
Sbjct:  146 EFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEPKKL--IDELHKRNVKLITIVDHGIRVDQNYSPFLSGMGKFCEIE-SGELFVGKMWPGTTVYPDFFREDTREWWAGLISEWLS-QGVDGIWLDMNEPTDF 327          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GANC_MOUSE (Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.057e-25
Identity = 67/192 (34.90%), Postives = 94/192 (48.96%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGD--EIRRFHELVPVDGLWIDMNEASNF 572
            G+ D +   GP+P  V  QY+   G  A  P +SLG+HQCRW Y +   V+ V   + +  IP DV+W D +H +  K FT +   +  PK +  L +  K   K +VI DP I V+  Y VY +      F+K  EG  +    WPG  ++ DF NPK   W+        +     +  LW DMNE S F
Sbjct:  313 GIIDVFLLTGPTPADVFKQYSYITGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKK--RKLVVISDPHIKVDPDYTVYAQAKEQGFFVKNPEGGDFEGVCWPGLSSYLDFTNPKVREWYSSLFAFPVYQGSTDILFLWNDMNEPSVF 502          
BLAST of CX295733 vs. ExPASy Swiss-Prot
Match: GLU2A_YEAST (Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae GN=ROT2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.865e-22
Identity = 68/203 (33.50%), Postives = 96/203 (47.29%), Query Frame = 3
Query:    6 GVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVD----GLWIDMNEASNFCSGLCKIPK 599
            GV D     GP    ++D++T   GRP   P  S+G+HQCRW Y++   V  V        IP D IW D ++ +  K FT    ++P PK L  L K+ K+G   +V+IDP +     Y +  R I  +V +K + G  Y+   WPG   + D ++      W     RF +L P D     +W DMNE S F       PK
Sbjct:  356 GVIDVVMSLGPDIPTIIDKFTDLTGRPFLPPISSIGYHQCRWNYNDEMDVLTVDSQMDAHMIPYDFIWLDLEYTNDKKYFTWKQHSFPNPKRL--LSKLKKLGRNLVVLIDPHL--KKDYEISDRVINENVAVKDHNGNDYVGHCWPGNSIWIDTISKYGQKIWKSFFERFMDL-PADLTNLFIWNDMNEPSIFDGPETTAPK 553          
The following BLAST results are available for this feature:
BLAST of CX295733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
GANAB_HUMAN2.687e-2934.90Neutral alpha-glucosidase AB OS=Homo sapiens GN=GA... [more]
AGLU_TETPY7.817e-2931.72Lysosomal acid alpha-glucosidase OS=Tetrahymena py... [more]
GANC_HUMAN1.474e-2734.90Neutral alpha-glucosidase C OS=Homo sapiens GN=GAN... [more]
GLU2A_SCHPO4.290e-2735.75Glucosidase 2 subunit alpha OS=Schizosaccharomyces... [more]
GANC_MACFA5.602e-2734.38Neutral alpha-glucosidase C (Fragment) OS=Macaca f... [more]
GANAB_DICDI5.602e-2733.85Neutral alpha-glucosidase AB OS=Dictyostelium disc... [more]
AGLU_SULSO8.090e-2632.80Alpha-glucosidase OS=Sulfolobus solfataricus GN=ma... [more]
AGLU_SULS98.090e-2632.80Alpha-glucosidase OS=Sulfolobus solfataricus (stra... [more]
GANC_MOUSE1.057e-2534.90Neutral alpha-glucosidase C OS=Mus musculus GN=Gan... [more]
GLU2A_YEAST1.865e-2233.50Glucosidase 2 subunit alpha OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionC05075C11SK DroRLeaf1 Citrus clementina cDNA clone C05075C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295733 ID=CX295733; Name=CX295733; organism=Citrus clementina; type=EST; length=650bp
TTGGGGGTGTTTTCGACTTTTACTTCTTCGCTGGGCCTTCACCGCTTGCT
GTTGTTGATCAGTATACAGCATTTATTGGGAGGCCTGCTCCTATGCCTTA
CTGGTCTCTAGGATTCCACCAGTGCAGATGGGGTTACCATAACCTGTCTG
TGGTCGAAGATGTTGTTGAGAACTACAAGAAGGCTAAAATTCCACTTGAT
GTGATCTGGAATGATGATGATCACATGGACGGACACAAGGATTTCACTCT
CAATCCTACCAACTATCCTCGTCCGAAGCTTTTGGCATTCCTTGAAAAAA
TACATAAAATAGGCATGAAATACATTGTCATTATTGACCCTGGAATTGGA
GTAAATTCTAGCTATGGTGTGTATCAAAGAGGTATAGCGAATGATGTTTT
CATCAAGTATGAGGGTGAACCCTACTTGGCTCAAGTTTGGCCTGGGGCTG
TCAATTTTCCTGACTTCCTCAATCCAAAAACCGTTTCATGGTGGGGTGAT
GAAATTCGCCGCTTTCATGAACTTGTCCCTGTAGATGGCTTGTGGATTGA
CATGAATGAAGCTTCAAATTTCTGTTCTGGACTTTGCAAAATACCTAAGG
GCAAGCAATGTCCAACTGGGACTGGACCCGGTTGGGTCTGTTGCTTGGAC
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