CX295738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 52/192 (27.08%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 22 IYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 I+RSL P +P ++ F+ + Y+ +A ++A + +++++ +++ + LG+ K V+++ PN ++ I LG+++ G + S AN VSE+ KQV+ S + +IT ++KVK L LP ++LG + + DL+E D + + QTD AL +SSG Sbjct: 12 IFRSLYPSVPIPD--KLTLPEFVLQGVEEYTENVAFVEAVTGKAVTYGDVVRDTKRLAKALTSLGLRKGQVMVVVLPNVAEYGIIALGIMSAGGVFSGANPTALVSEIKKQVEASGARGIITDATNYEKVKSLGLPVIVLGEE----------KIEGAVNWKDLLEAGDKCGDTDNEEILQTDLCALPFSSG 191
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 58/194 (29.90%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P + + F N + ++S+ LID +D ++++ + KV+ LGI +KD ++I PN +F F+G +GAI++ AN ++T +E+ KQ K S+ K+VIT KVK + ++ F +LI+ +IPDV ++ D AL YSSG Sbjct: 12 DLIFRSKLPDIYIPKH--LPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAI-------ENDLKVICVDSAPEGCVHFSELIQ--SDEHEIPDVKIQPDDVVALPYSSG 194
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 57/194 (29.38%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P + + F N + +SS+ LI+ +D+ ++++ + KV+ LGI +KD ++I PNS +F F+G +GAI++ AN ++T +E+ KQ K S+ K++IT KVK S++ F +L + +IP+V ++ D AL YSSG Sbjct: 14 DLIFRSKLPDIYIPKH--LPLHSYCFENISEFSSRPCLINGANDQIYTYAEVELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVKQAKASSAKIIITQSCFVGKVKD-------YASENDVKVICIDSAPEGCLHFSELTQ--SDEHEIPEVKIQPDDVVALPYSSG 196
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 58/194 (29.90%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P + + F N + ++S+ LID +D ++++ + KV+ LGI +KD ++I PN +F F+G +GAI++ AN ++T +E+ KQ K S+ K+VIT KVK + ++ F +LI+ +IPDV ++ D AL YSSG Sbjct: 12 DLIFRSKLPDIYIPKH--LPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAI-------ENDLKVICVDSVPEGCVHFSELIQ--SDEHEIPDVKIQPDDVVALPYSSG 194
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.960e-16 Identity = 62/200 (31.00%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 19 GIYRSLRPPFVLPSDPSFSMVHFLF-RNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGS--KDXXXXXXXXXXXXXXXXFHDLIE---LSGSVTDIPDVSVKQTDAAALLYSSG 597 GIY S+ PP LP+DPS ++V LF R + L+DA + ++S + + +V ++ R G+ K VVL+ PNS+ FP+ FL V+A GA+A+T N + +E++ Q + + LV+ + ++ L P VL+ F +++ G+ T +P V Q DA A+LYSSG Sbjct: 33 GIYSSIHPPVALPTDPSLTLVAHLFARLPLADPGAPTLVDAATASAVSRADLRRLVASLAAGLRRRHGVRKGSVVLLLLPNSVAFPVSFLAVLAAGAVATTMNPSSSPAEIAAQARATGACLVLASRDGAARLPPLAAPVVLVPEILDHSAAADDGDDDQRVFAAFRAMLDGGGGDGTETAVPVVG--QDDAVAILYSSG 230
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL2_ARATH (4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.050e-16 Identity = 56/194 (28.87%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P+ + ++F N + +++K LI+ + E +++ K++ +LG+ + DVV+I PNS + + FL IGAI ++AN +T +E+SKQ K S KL++T DK+K L VL+ + D F +L + D + D AL +SSG Sbjct: 20 DVIFRSRLPDIYIPNH--LPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVKQHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDKIKNLQNDGVLIVTTD------SDAIPENCLRFSELTQSEEPRVDSIPEKISPEDVVALPFSSG 205
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.125e-15 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 13 RDGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVK 414 +D I+RS P +P + + + F N + +SS+ LI+ +DE +++ + I +V LGI + D ++I PNS +F FLG IG+I++ AN +T +E+ KQ K SN KL+IT DKVK Sbjct: 12 KDIIFRSKLPDIYIPKN--LPLHSYCFENISKFSSRPCLINGATDEIFTYADVELISRRVGSGLSKLGIKQGDTIMILLPNSPEFVFAFLGASFIGSISTMANPFFTSTEVIKQAKASNAKLIITQGCYVDKVK 143
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.125e-15 Identity = 64/196 (32.65%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 25 YRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQ-FKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKV-KGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIP--DVSVKQTDAAALLYSSG 597 +RS R LP+DP +V FL S +S +AL+DA + ++F++ ++++ S H + + K V LI +PNS+ FP+ L +++GA+ +TAN + T +E++KQV D+ P L T EL K+ + +L VLL S + E+S + D V Q D A LLYSSG Sbjct: 22 FRSRRADVPLPADPEVDVVSFLA--SRRHSGVVALVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVLAFTTRELLPKLPRAHDLRVVLLES------ARLPGDSSDPRIVATIEEISATTPDPARRKDRVTQDDPATLLYSSG 209
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 22 IYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 I+RS P +P+ + + F +S S K LI + +S ++ + I +V+ LGI K DV++I NS +F F+G IGA+++TAN YT EL KQ+K S KL+IT + DK+K L L+ + + F LI + V + DAAAL +SSG Sbjct: 34 IFRSKLPDIDIPNH--LPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGLYKLGIRKGDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLKNLGENLTLITTDE--------PTPENCLPFSTLITDDETNPFQETVDIGGDDAAALPFSSG 215
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.275e-15 Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 1 Query: 22 IYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 +++S P +P + + F+N + ++ + LI + ++ +++ I K++ +LGI K DVV+I NS F FL + IGA+A+TAN YT E+ KQ S KL+IT DK++ + G+K H + + +D+P+V + DA A+ +SSG Sbjct: 26 VFKSKLPD--IPISNHLPLHSYCFQNLSQFAHRPCLIVGPASKTFTYADTHLISSKIAAGLSNLGILKGDVVMILLQNSADFVFSFLAISMIGAVATTANPFYTAPEIFKQFTVSKAKLIITQAMYVDKLRNHD------GAKLGEDFKVVTVDDPPENCLHFSVLSEANESDVPEVEIHPDDAVAMPFSSG 209 The following BLAST results are available for this feature:
BLAST of CX295738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295738 ID=CX295738; Name=CX295738; organism=Citrus clementina; type=EST; length=604bpback to top |