CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 152
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 2 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 152
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RASW_DICDI (Ras-like protein rasW OS=Dictyostelium discoideum GN=rasW PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 57/170 (33.53%), Postives = 89/170 (52.35%), Query Frame = 2 Query: 71 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLREL-RDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKK 577 + + ++GD GVGK+ + +F N F TI + + L VD +V I DTAGQ+ A+ + R G +LVY VT S+F+ ++ + ++ R ++ +M+IGNK DL V+ ++GK A + FME SA TNV+ F E + RIV +K Sbjct: 9 VISLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCL-VDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQIQFFREQIIRVLDSDDVPIMMIGNKIDLDDERQVTFQEGKDLARCLGMSFMEVSAKNRTNVEEVFNETV----RIVKRK 173
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLR-HLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+VL+GD G GK+ + R EF +T+GVE + D I+ +WDTAGQE++ + YY ++++DVT T++NV W R+L NI ++L GNK D++ V T +F K++L + + SA N + F Sbjct: 8 FKLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGVEVHPLNFATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKERKVKAKT---ITFHRKKNLQYYDISAKSNYNFEKPF 158
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: GSP1_CANAL (GTP-binding nuclear protein GSP1/Ran OS=Candida albicans GN=GSP1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLR-HLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+VL+GD G GK+ + R EF + +T+GVE + + +K +WDTAGQE++ + YY ++++DVT T++NV W R+L NI ++L GNK D++ V T +F K++L + + SA N + F Sbjct: 8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVNPLGFHTNFGELKFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKERKVKAKT---ITFHRKKNLQYYDISAKSNYNFEKPF 158 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |