CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.663e-21
Identity = 60/147 (40.82%), Postives = 83/147 (56.46%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475
            ++DGAAA+VL++      L ++ +A+I  FADAA  P  F  AP+  +PK +  AGL+   I  +E+NEAFS                             VV +AN K+L +DP++VN HGGAVSLGHP+G SGARI+V L   L+
Sbjct:  283 LNDGAAAVVLMTAEAAQRLKVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFS-----------------------------VVVLANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHALK 400          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_BOVIN (Acetyl-CoA acetyltransferase, mitochondrial OS=Bos taurus GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475
            ++DGAAA+VL++      L ++ +A+I  FADAA  P  F  AP+  +PK + +AGL+   I  +E+NEAFS                             VV +AN K+L +DP++VN +GGAVSLGHP+G SGARI+V L   L+
Sbjct:  281 LNDGAAAVVLMTADAAKRLNVKPLARIAAFADAAVEPIDFPLAPAYAVPKVLKDAGLKKEDITMWEVNEAFS-----------------------------VVVLANIKMLEMDPQKVNINGGAVSLGHPIGMSGARIVVHLAHALK 398          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_XENTR (Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20
Identity = 66/171 (38.60%), Postives = 90/171 (52.63%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLE 547
            ++DGAAALVL++      L +  +A+I  FADAA  P  F  AP+  +PK ++ AGL+   I  +EINEAFS                             VV +AN K+L +DP +VN +GGAVSLGHP+G SGARI+  +  VL  KK              ASA+++E
Sbjct:  279 LNDGAAALVLMTAGAASRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFS-----------------------------VVVLANVKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHVL--KKGQFGIAGICNGGGGASAVLIE 418          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.078e-20
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 451
            ++DGAAALVL++      L +  +AKI  FADAA AP  F  AP+  +PK +  AG++   I  +EINEAFS                             VV +AN K+L +DP++VN +GGAVSLGHP+G SGARI+
Sbjct:  279 LNDGAAALVLMTADAAQRLNVTPLAKIVAFADAAVAPIDFPIAPAFAVPKVLKAAGIKKEDIAMWEINEAFS-----------------------------VVVLANIKMLDIDPDRVNINGGAVSLGHPIGMSGARIV 388          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THILB_XENLA (Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-B PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 475
            ++DGAAALVL++      L +  +A+I  FADAA  P  F  AP+  IPK ++ AGL+   I  +EINEAFS                             VV +AN K+L +DP +VN +GGAVSLGHP+G SGARI+  +   LR
Sbjct:  279 LNDGAAALVLMTAEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAIPKLLSEAGLKKEDIAMWEINEAFS-----------------------------VVVLANIKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHALR 396          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THILA_XENLA (Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-A PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.136e-20
Identity = 65/171 (38.01%), Postives = 90/171 (52.63%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLE 547
            ++DGAAAL+L++      L +  +A+I  FADAA  P  F  AP+  +PK ++ AGL+   I  +EINEAFS                             VV +AN K+LG+DP +VN +GGAVSLGHP+G SGARI+  +   L  KK              ASA+++E
Sbjct:  279 LNDGAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFS-----------------------------VVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGHMAHAL--KKGQFGIAGICNGGGGASAVLIE 418          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            ++DGA+A+VL+S  +   LGL  IAKIR  A A   P      P     KA+  AGL+   ID++E+NEAF+ ++               LP            + + KLLG+  E+VN +GGA++LGHPLGCSGARI  TLL +++ K
Sbjct:  245 LTDGASAMVLMSAERAEALGLTPIAKIRSMAVAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAGQS---------------LP-----------VLKDLKLLGVMEEKVNLNGGAIALGHPLGCSGARISTTLLNIMQAK 367          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.725e-19
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            ++DGA+A++L+S  +   LGL  +AKIR  A A   P      P     KA+  AGL+   ID++E+NEAF+ ++               LP            I + KL+G+  ++VN +GGA++LGHPLGCSGARI  TLL V+  K
Sbjct:  245 LTDGASAMLLMSAERAQALGLTPMAKIRSMATAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAAQS---------------LP-----------VIKDLKLMGVVDQKVNLNGGAIALGHPLGCSGARISTTLLNVMAAK 367          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18
Identity = 57/149 (38.26%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            VSDGAAA++L    K  ELGL ++  +R +A     P+     P+  IP A+  AGL  S +D +EINEAF+ +                             A   +K L L PE+VN  GGAV+LGHPLGC+GAR ++TLL  L+ +
Sbjct:  278 VSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQ----------------------------AAYCVEK-LRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR 397          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18
Identity = 55/149 (36.91%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            VSDGAAA++L    K  ELGL ++  +R +A     P+     P+  IP A+  AGL  + ID +EINEAF+ +                             A+   + LG+  E+VN  GGA++LGHPLGC+GAR +VTLL  L+ +
Sbjct:  278 VSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQ-----------------------------AVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
THIL_RAT1.663e-2140.82Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]
THIL_BOVIN2.837e-2140.14Acetyl-CoA acetyltransferase, mitochondrial OS=Bos... [more]
THIL_XENTR1.078e-2038.60Acetyl-CoA acetyltransferase, mitochondrial OS=Xen... [more]
THIL_DANRE1.078e-2042.45Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]
THILB_XENLA2.401e-2041.50Acetyl-CoA acetyltransferase B, mitochondrial OS=X... [more]
THILA_XENLA3.136e-2038.01Acetyl-CoA acetyltransferase A, mitochondrial OS=X... [more]
FADA_MARAV2.655e-1939.603-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
FADA_HAHCH7.725e-1938.263-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]
THIK_HUMAN2.248e-1838.263-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKB_MOUSE2.935e-1836.913-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
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