CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A+IR  A     P      P      A+  AGL AS ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A+IR  A     P      P      A+  AGL AS ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A+IR  A     P      P      A+  AGL AS ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 2
Query:   23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            S+  +SDGA+A++++S  K  ELGL + AKIR  A +   P      P     KA+  AGL    ID +E+NEAF+ ++               LP            I +  L  +  E++N +GGA++LGHPLGCSG+RI  TL+
Sbjct:  237 SSSALSDGASAMLIMSEEKANELGLTIRAKIRSMAVSGCDPAIMGYGPVPATKKALKRAGLSIDDIDLFELNEAFAAQS---------------LP-----------CIKDLGLFDVMEEKINLNGGAIALGHPLGCSGSRIATTLI 357          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 472
            ++DGAAA+VL+   +     L+ +A++  ++ A   P      P   I +A+A AG     +D +EINEAF+                              V+ A  K LGL PE+VN  GGA++LGHPLG SG RILVTLL  L
Sbjct:  254 MNDGAAAVVLMKKTEAESRMLKPLAQVVSWSQAGVEPSVMGVGPIPAIKQAVAKAGWSLEDVDVFEINEAFAA-----------------------------VSAAIAKELGLSPEKVNIDGGAIALGHPLGASGCRILVTLLHTL 370          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++S  K  ELG+ + A+I+G A A   P      P     KA+  AGL    +D  E+NEAF+ ++               LP              +  LL +  E+VN +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQS---------------LP-----------CAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMEAK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++S  K  ELG+ + A+I+G A A   P      P     KA+  AGL    +D  E+NEAF+ ++               LP              +  LL +  E+VN +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQS---------------LP-----------CAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLMEAK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++   K   LGL + A+IR  A A          P     KA+A AG+  + +D  E+NEAF+ ++               LP            + +  LL +  E++N +GGA++LGHPLGCSGARI  TL+ ++ HK
Sbjct:  241 LSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQS---------------LP-----------CVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEHK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL   A+IR  A     P      P      A+  AGL AS+ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+ ++  K
Sbjct:  241 LSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASEIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++   K   LGL + A+IR  A A          P     KA+A AG+  + +D  E+NEAF+ ++               LP            + +  LL +  E++N +GGA++LGHPLGCSGARI  TL+ ++ HK
Sbjct:  241 LSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQS---------------LP-----------CVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEHK 363          
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
FADA_SALTI6.121e-1636.243-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fad... [more]
FADA_SALPA6.121e-1636.243-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADA_SALCH6.121e-1636.243-ketoacyl-CoA thiolase OS=Salmonella choleraesuis... [more]
FADA_ALISL6.121e-1636.053-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida ... [more]
THIC_RAT7.994e-1636.30Acetyl-CoA acetyltransferase, cytosolic OS=Rattus ... [more]
FADA_VIBVY7.994e-1635.573-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADA_VIBVU7.994e-1635.573-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
FADA_SHEON7.994e-1634.233-ketoacyl-CoA thiolase OS=Shewanella oneidensis G... [more]
FADA_ENT387.994e-1636.243-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADA_SHESR1.044e-1534.233-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
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