CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+ ++                             +A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQS-----------------------------LAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+ ++                             +A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQS-----------------------------LAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+ ++                             +A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQS-----------------------------LAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+ ++                             +A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQS-----------------------------LAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++++   K   LGL + A+IR  A A          P     KA+A AG+  + +D  E+NEAF+ ++               LP            + +  LL +  +++N +GGA++LGHPLGCSGARI  TL+ ++ HK
Sbjct:  241 LSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQS---------------LP-----------CVKDLGLLDVVEDKINLNGGAIALGHPLGCSGARISTTLINLMEHK 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++L+S  +  ELGL+  A++R  A     P      P      A+  AGL  S ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+  +  K
Sbjct:  241 LSDGAAAMLLMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSTSDIDVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINQMERK 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 50/143 (34.97%), Postives = 72/143 (50.35%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAAA++L+S  K   LGL V+A+I  +A A   P      P     +A+  AG    Q+D  E NEAF+ +                             ++A  + LG D  +VN +GGA++LGHP+G SG R+LVTLL
Sbjct:  250 LNDGAAAVLLMSAAKAKALGLPVLARIASYASAGVDPAIMGIGPVSATRRALDKAGWSLEQLDLIEANEAFAAQ-----------------------------SLAVGRELGWDAARVNVNGGAIALGHPIGASGCRVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+ ++                             +A  + L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPAIMGIAPVDAVEKALKRSKKELSDIDVFELNEAFAAQS-----------------------------LAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+                            Q++A+  +  L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAA---------------------------QLLAVDRE--LKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
[Close]
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463
            ++DGAA ++++S  K  EL ++ +A + GF      P     AP   + KA+  +  E S ID +E+NEAF+                            Q++A+  +  L L PE+VN  GGA++LGHP+G SGAR+LVTLL
Sbjct:  250 INDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAA---------------------------QLLAVDRE--LKLPPEKVNVKGGAIALGHPIGASGARVLVTLL 363
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
THLA_STAAC2.326e-1534.27Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAB2.326e-1534.27Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA82.326e-1534.27Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA32.326e-1534.27Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
FADA_SHESA2.326e-1533.563-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_KLEP72.326e-1535.573-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
ATOB_PSEAE2.326e-1534.97Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
THLA_STAAR3.038e-1534.27Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAN3.038e-1534.97Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM3.038e-1534.97Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
back to top