CX295756

Overview
NameCX295756
Unique NameCX295756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL   A+IR  A     P      P      A+  AGL AS ID +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TL+ ++  +
Sbjct:  241 LSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASDIDLFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERR 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  +LGL+  A +R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++ HK
Sbjct:  241 LSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEHK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            ++DGAAA++L+S  K  +LGL+ +A I+G+A     PE     P     KA++ AG     +D  E NEAF+ +                             A+   K LG   ++VN +GGA++LGHP+G SG R+LVTLL  ++ +
Sbjct:  249 INDGAAAVLLMSTQKADQLGLKPLAIIKGYALTGCEPEIMGIGPVSATRKALSKAGWTVEDLDLVEANEAFAAQ-----------------------------ALGVAKELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRR 368          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA A++L+     ++ GL ++   R FA     P      P++ IP A   AGL  S ID +EINEAF+ +                              + + K L LD E+VN +GGA+++GHPLG +GAR + TLL  ++ +
Sbjct:  295 ISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQ-----------------------------YVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRR 414          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A++R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++  K
Sbjct:  241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A++R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++  K
Sbjct:  241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A++R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++  K
Sbjct:  241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCNPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A++R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++  K
Sbjct:  241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGAAA++++S  +  ELGL+  A++R  A     P      P      A+  AGL AS I  +E+NEAF+ +               +LP            I +  L+    E++N +GGA++LGHPLGCSGARI  TLL ++  K
Sbjct:  241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363          
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481
            +SDGA+A++L+   +  ELGL V+A+   F      P      P + I K +   GLE  QI Y+EINEAF                           + QV+    +  +G D  +VN +GG+++LGHP+G SGARI+ TLL V++++
Sbjct:  236 LSDGASAVLLMKRRRADELGLPVVAEFIDFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAF---------------------------ASQVLCCLRKLQIGED--RVNRYGGSIALGHPIGASGARIVCTLLSVMKNE 355          
The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
FADA_ENTS83.038e-1535.573-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]
FADA_ECOL53.038e-1535.573-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
THIL_CHRVO3.967e-1533.56Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
THIK5_ARATH3.967e-1532.893-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
FADA_SHIFL3.967e-1535.573-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fa... [more]
FADA_SHIF83.967e-1535.573-ketoacyl-CoA thiolase OS=Shigella flexneri serot... [more]
FADA_SHIBS3.967e-1535.573-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADA_ECOLI3.967e-1535.573-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADA_ECOHS3.967e-1535.573-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 ... [more]
THIK_ENCCU5.181e-1534.233-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]

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Properties
Property NameValue
Genbank descriptionC05075E11SK DroRLeaf1 Citrus clementina cDNA clone C05075E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bp
CTTATCAGTTTTGGGTTGTTGGTCTACTGTTGTGGTCAGTGATGGTGCAG
CAGCACTTGTACTGGTGAGTGGAGTGAAGGTGCTTGAGCTTGGTTTGCAA
GTAATAGCTAAGATTAGGGGATTTGCTGACGCAGCTCAGGCTCCAGAGTG
GTTTACAACTGCTCCATCCCTTGTAATACCAAAAGCCATAGCAAATGCTG
GCTTGGAAGCTTCTCAGATTGATTACTATGAAATAAACGAAGCTTTTTCT
GTAAGAAATCATGTTCCTACCTAGTGATGCCGCTAGTATCCAAAGGTTAG
TTTATTACCATTTCATGTTCTAACCTCCTCTTTGCAGGTTGTAGCTATTG
CCAATCAAAAACTGCTTGGTCTTGATCCTGAACAGGTTAATGCGCATGGT
GGAGCCGTATCCCTGGGTCATCCGTTAGGGTGTAGTGGAGCTCGTATCTT
GGTCACATTATTGGGGGTACTGAGACATAAGAAGGGGAAGTACGGGGTTG
GTGGCATCTGCAATGGTGGAGGGGGGGCATCCGCTCTTGTTCTTGAGCTC
ATGCAAGCGGTGCGGGTGGGACATTCCAAGCTATGAATTGATGATGTGTA
CTGACTGTGGAACATCACCTCCTGTGCTATTGTCTCTTATCTCTTTGTTA
AGTTGTCTACTTGAATGAGAAA
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