CX296271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296271 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15 Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = -3 Query: 499 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 708 TLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 7 TLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = -3 Query: 313 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 498 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLE 62
BLAST of CX296271 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = -3 Query: 499 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 708 TLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 7 TLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 31/61 (50.82%), Postives = 47/61 (77.05%), Query Frame = -3 Query: 316 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 498 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHL 61
BLAST of CX296271 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = -3 Query: 310 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 690 +T + D++ +K ++ K +P Q L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K Sbjct: 20 MTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRK 152
BLAST of CX296271 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 43/136 (31.62%), Postives = 70/136 (51.47%), Query Frame = -3 Query: 301 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 705 L G + V +S T+ +K +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + T Sbjct: 10 LGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCT 145
BLAST of CX296271 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 40/135 (29.63%), Postives = 68/135 (50.37%), Query Frame = -3 Query: 304 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 690 +T + SD + + I+ + + Q L+ K L+ R L+ Y I KE+T+HL L++ + + G+ L V S ++ VK I++ +PP +Q + GK+LEDG+ +ADYNI+ S Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGS 150 The following BLAST results are available for this feature:
BLAST of CX296271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296271 ID=CX296271; Name=CX296271; organism=Citrus clementina; type=EST; length=710bpback to top |