CX296272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76 HSP 2 Score: 97.0561 bits (240), Expect = 9.705e-20 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76 HSP 3 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 46 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 270 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 2 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 274 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 498 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 3 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 502 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76 HSP 2 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76 HSP 3 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 30/59 (50.85%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 267 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 2 Score: 90.1225 bits (222), Expect = 1.186e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 495 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 3 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 672 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T Y Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHY 59
BLAST of CX296272 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 40 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 270 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 HSP 2 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 268 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 498 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 HSP 3 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 30/60 (50.00%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 496 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYT 675 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYS 60 The following BLAST results are available for this feature:
BLAST of CX296272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296272 ID=CX296272; Name=CX296272; organism=Citrus clementina; type=EST; length=691bpback to top |