CX296277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 2.305e-13 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 273 SLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 S A++ P + A +E + K++R YRG+RQRPWGKWAAEIRDP + RVWLGTF+TAE Sbjct: 47 SFARVDSSHNPIEESMSKAFPEEAREKKRR---YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAE 110
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.932e-13 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 213 AATKQLPHNFESTPFSDEHQSLAKIKR-PQPPSYLNSCSASGDEKKPKRQ-----RKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 +A Q+ N S+ +++HQ + ++ P PP+ P Q RK YRG+RQRPWGKWAAEIRDP+K RVWLGTF TAE Sbjct: 46 SALTQVIGNQSSSHDNNQHQPVVYNQQDPNPPA-------------PPTQDQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAE 125
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13 Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = 3 Query: 153 FPRHGGSRV----TASDLWPNSPFAATKQLPHNFEST---------PFSDEHQSLAKIKRPQPPSYLNSCS-ASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 FP H + + S +P+S F + Q P N++S D + + P P ++ +SG KP + LYRG+RQR WGKW AEIR PR R+WLGTF+TAEE Sbjct: 61 FPSHSTTSYPDIYSGSMTYPSS-FGSDLQQPENYQSQFHYQNTITYTHQDNNTCMLNFIEPSQPGFMTQPGPSSGSVSKPAK----LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEE 177
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 3 Query: 360 RKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 R+ YRG+RQRPWGKWAAEIRDP+K RVWLGTF TAE Sbjct: 86 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAE 123
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13 Identity = 41/73 (56.16%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 258 SDEHQSLAKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 SDE QS A + Q P+ N S SG KK +RG+RQRPWGKWAAEIRDP + R+WLGTF TAEE Sbjct: 99 SDETQSPASSR--QRPN--NKVSVSGQIKK--------FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEE 159
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.548e-12 Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 207 PFAATKQLPHNF--ESTPFSDEHQSL---AKIKRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNTAEE 476 P T QL HNF E+ P + +QS + + + +PP S S + K K + + YRG+R+RPWGK+AAEIRDP +KG R+WLGT++TA E Sbjct: 29 PSLFTNQL-HNFHSETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKTEKEEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVE 123
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12 Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 3 Query: 372 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 +RG+RQRPWGKWAAEIRDP K VR+WLGT+NTAEE Sbjct: 122 FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEE 156
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 324 SASGDEKKP--KRQRKNL-------------YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 S D++KP K+++K + +RG+RQRPWGKWAAEIRDP + VRVWLGTF+TAEE Sbjct: 56 SVVSDKEKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEE 121
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.347e-12 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 3 Query: 324 SASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAE 473 S SGD+ P+R+ YRG+RQRPWGKWAAEIRDP K RVWLGTF+ AE Sbjct: 175 SFSGDQ--PRRR----YRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAE 218
BLAST of CX296277 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.415e-12 Identity = 35/63 (55.56%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 288 KRPQPPSYLNSCSASGDEKKPKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEE 476 KR S + S SG +K YRG+RQRPWGKWAAEIRDP + R+WLGTF TAEE Sbjct: 96 KRINVDSTVQKPSVSGQNQKK-------YRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEE 151 The following BLAST results are available for this feature:
BLAST of CX296277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296277 ID=CX296277; Name=CX296277; organism=Citrus clementina; type=EST; length=478bpback to top |